Recoup: flexible and versatile signal visualization from next generation sequencing.

ABSTRACT:

Background

The relentless continuing emergence of new genomic sequencing protocols and the resulting generation of ever larger datasets continue to challenge the meaningful summarization and visualization of the underlying signal generated to answer important qualitative and quantitative biological questions. As a result, the need for novel software able to reliably produce quick, comprehensive, and easily repeatable genomic signal visualizations in a user-friendly manner is rapidly re-emerging.

Results

recoup is a Bioconductor package for quick, flexible, versatile, and accurate visualization of genomic coverage profiles generated from Next Generation Sequencing data. Coupled with a database of precalculated genomic regions for multiple organisms, recoup offers processing m

SUBMITTER: Moulos P 

PROVIDER: S-EPMC7789646 | biostudies-literature | 2021 Jan

REPOSITORIES: biostudies-literature