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The complete mitochondrial genome of Salamandra salamandra (Amphibia: Urodela: Salamandridae).

ABSTRACT: The complete mitochondrial genome of Salamandra salamandra was reconstructed using bycatch sequences from an RNAseq library generated from muscle tissue. This study shows the potential of using data originally produced for transcriptome assembly to additionally generate complete mitochondrial genomes. The resulting mitogenome was circular, consisted of 16,331?bp and followed the standard vertebrate gene order. Subsequent analysis of the current mitochondrial genome sequence for the species as listed on GenBank highlighted a species misidentification.

SUBMITTER: Mulder KP 

PROVIDER: S-EPMC7800573 | biostudies-literature | 2016 Nov

REPOSITORIES: biostudies-literature

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The complete mitochondrial genome of <i>Salamandra salamandra</i> (Amphibia: Urodela: Salamandridae).

Mulder Kevin P KP   Lourenço André A   Lourenço André A   Carneiro Miguel M   Velo-Antón Guillermo G  

Mitochondrial DNA. Part B, Resources 20161122 1

The complete mitochondrial genome of <i>Salamandra salamandra</i> was reconstructed using bycatch sequences from an RNAseq library generated from muscle tissue. This study shows the potential of using data originally produced for transcriptome assembly to additionally generate complete mitochondrial genomes. The resulting mitogenome was circular, consisted of 16,331 bp and followed the standard vertebrate gene order. Subsequent analysis of the current mitochondrial genome sequence for the specie  ...[more]

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