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Open-source computational framework for studying Drosophila behavioral phase.


ABSTRACT: This protocol describes a standardized method for analyzing Drosophila behavioral rhythmicity under light dark cycles, temperature ramps, and free running conditions. The protocol constitutes a step-by-step guide from generation of appropriate Drosophila genetic crosses to behavioral experiments. We also provide an open-source computational framework using R for the analysis of the phase of behavior using circular statistics. An extended method for complete use is also provided. For complete details on the use and execution of this protocol, please refer to Fernandez et al. (2020).

SUBMITTER: Kostadinov B 

PROVIDER: S-EPMC7829270 | biostudies-literature | 2021 Mar

REPOSITORIES: biostudies-literature

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Open-source computational framework for studying <i>Drosophila</i> behavioral phase.

Kostadinov Boyan B   Lee Pettibone Hannah H   Bell Evardra Valerie EV   Zhou Xiaona X   Pranevicius Ausra A   Shafer Orie Thomas OT   Fernandez Maria Paz MP  

STAR protocols 20210122 1


This protocol describes a standardized method for analyzing <i>Drosophila</i> behavioral rhythmicity under light dark cycles, temperature ramps, and free running conditions. The protocol constitutes a step-by-step guide from generation of appropriate <i>Drosophila</i> genetic crosses to behavioral experiments. We also provide an open-source computational framework using R for the analysis of the phase of behavior using circular statistics. An extended method for complete use is also provided. Fo  ...[more]

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