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Characterization and phylogenetic analysis of the complete chloroplast genome of Actinidia latifolia (Actinidiaceae).

ABSTRACT: The complete chloroplast (cp) genome of Actinidia latifolia was sequenced and assembled using Illumina pair-end sequencing data. The cp genome is 157,021 bp in length and comprises a large single copy (LSC) region of 88,557 bp and a small single copy (SSC) region of 21,562 bp separated by two inverted repeat (IR) regions of 23,451 bp. A total of 113 unique genes were identified, including 79 protein-coding genes, 30 tRNA genes, and four rRNA genes. Phylogenetic analysis based on cp genomes of 20 Actinidiaceae species revealed that A. latifolia was evolutionarily close to A. eriantha, A. styracifolia, and A. fulvicoma.

SUBMITTER: Yang A

PROVIDER: S-EPMC7928189 | biostudies-literature | 2021 Mar

REPOSITORIES: biostudies-literature

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Characterization and phylogenetic analysis of the complete chloroplast genome of Actinidia latifolia (Actinidiaceae).

Yang Aihong A Hu Miao M Liu Tengyun T Liu Shujuan S Zhou Hua H Yu Faxin F

Mitochondrial DNA. Part B, Resources 20210301 2

The complete chloroplast (cp) genome of Actinidia latifolia was sequenced and assembled using Illumina pair-end sequencing data. The cp genome is 157,021 bp in length and comprises a large single copy (LSC) region of 88,557 bp and a small single copy (SSC) region of 21,562 bp separated by two inverted repeat (IR) regions of 23,451 bp. A total of 113 unique genes were identified, including 79 protein-coding genes, 30 tRNA genes, and four rRNA genes. Phylogenetic analysis based on cp genome ...[more]

PMID: 33763545

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