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The complete mitochondrial genome of Trematomus loennbergii (Perciformes, Nototheniidae).

ABSTRACT: The complete mitochondrial genome of Trematomus loennbergii was studied using NGS technology with PacBio platform. The mitochondrial genome size was 19,374bp and it had 13 protein-coding genes, 22 tRNAs and 2 rRNAs. There were 4 types of stop codons which were TAA, TAG, AGG and T(AA) but start codon type was only one (ATG). The contents of GC were 44.09% and AT contents were 55.91%. To conduct phylogenetic analysis, 12 species in 3 families were used. The result suggested that T. loennbergii was close to Pagothenia borchgrevinki in Nototheniidae. This study would provide a fundamental data for molecular evolution of T. loennbergii.

SUBMITTER: Choi E

PROVIDER: S-EPMC7995823 | biostudies-literature | 2021 Mar

REPOSITORIES: biostudies-literature

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The complete mitochondrial genome of Trematomus loennbergii (Perciformes, Nototheniidae).

Choi Eunkyung E Im Tae-Eul TE Lee Seung Jae SJ Jo Euna E Kim Jinmu J Kim Sun Hee SH Chi Young Min YM Kim Jeong-Hoon JH Park Hyun H

Mitochondrial DNA. Part B, Resources 20210318 3

The complete mitochondrial genome of Trematomus loennbergii was studied using NGS technology with PacBio platform. The mitochondrial genome size was 19,374bp and it had 13 protein-coding genes, 22 tRNAs and 2 rRNAs. There were 4 types of stop codons which were TAA, TAG, AGG and T(AA) but start codon type was only one (ATG). The contents of GC were 44.09% and AT contents were 55.91%. To conduct phylogenetic analysis, 12 species in 3 families were used. The result suggested that T. loenn ...[more]

PMID: 33796728

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