Bioimage analysis workflows: community resources to navigate through a complex ecosystem.

ABSTRACT: Workflows are the keystone of bioimage analysis, and the NEUBIAS (Network of European BioImage AnalystS) community is trying to gather the actors of this field and organize the information around them.  One of its most recent outputs is the opening of the F1000Research NEUBIAS gateway, whose main objective is to offer a channel of publication for bioimage analysis workflows and associated resources. In this paper we want to express some personal opinions and recommendations related to finding, handling and developing bioimage analysis workflows.  The emergence of "big data" in bioimaging and resource-intensive analysis algorithms make local data storage and computing solutions a limiting factor. At the same time, the need for data sharing with collaborators and a general shift towards remo

SUBMITTER: Paul-Gilloteaux P 

PROVIDER: S-EPMC8182692 | biostudies-literature | 2021

REPOSITORIES: biostudies-literature