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Draft Genome Sequence of Xylaria grammica EL000614, a Strain Producing Grammicin, a Potent Nematicidal Compound.

ABSTRACT: An endolichenic fungus, Xylaria grammica strain EL000614, showed strong nematicidal effects against plant pathogenic nematode, Meloidogyne incognita by producing grammicin. We report genome assembly of X. grammica EL000614 comprised of 25 scaffolds with a total length of 54.73 Mb, N50 of 4.60 Mb, and 99.8% of BUSCO completeness. GC contents of this genome were 44.02%. Gene families associated with biosynthesis of secondary metabolites or regulatory proteins were identified out of 13,730 gene models predicted.

SUBMITTER: Park SY

PROVIDER: S-EPMC8259839 | biostudies-literature | 2021

REPOSITORIES: biostudies-literature

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Draft Genome Sequence of Xylaria grammica EL000614, a Strain Producing Grammicin, a Potent Nematicidal Compound.

Park Sook-Young SY Jeon Jongbum J Kim Jung A JA Jeon Mi Jin MJ Yu Nan Hee NH Kim Seulbi S Park Ae Ran AR Kim Jin-Cheol JC Lee Yerim Y Kim Youngmin Y Choi Eu Ddeum ED Jeong Min-Hye MH Lee Yong-Hwan YH Kim Soonok S

Mycobiology 20210428 3

An endolichenic fungus, Xylaria grammica strain EL000614, showed strong nematicidal effects against plant pathogenic nematode, Meloidogyne incognita by producing grammicin. We report genome assembly of X. grammica EL000614 comprised of 25 scaffolds with a total length of 54.73 Mb, N50 of 4.60 Mb, and 99.8% of BUSCO completeness. GC contents of this genome were 44.02%. Gene families associated with biosynthesis of secondary metabolites or regulatory proteins were identified o ...[more]

PMID: 34290553

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