TinselR-an R Shiny Application for Annotating Phylogenetic Trees.

ABSTRACT: Public health laboratories obtain whole-genome sequences of pathogens to confirm outbreaks and identify transmission routes. Here, we present tinselR, an open-source and user-friendly application for visualization and annotation of relatedness among pathogens with phylogenetic trees. By combining annotation and phylogenetics, we simplify one critical step in the pathogen analysis workflow.

SUBMITTER: Hamlin JAP 

PROVIDER: S-EPMC8265219 | biostudies-literature | 2021 Jul

REPOSITORIES: biostudies-literature