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The complete mitochondrial genome of the strawberry aphid Chaetosiphon fragaefolii Cockerell, 1901 (Hemiptera: Aphididae) from California, USA.

ABSTRACT: The aphid Chaetosiphon fragaefolii Cockerell, 1901 is an agricultural pest and known vector of strawberry viruses. To better understand its biology and systematics, we performed a genomic analysis on C. fragaefolii collected from Quinalt strawberry plants from Pacific Grove, Monterey county, California, USA using Oxford Nanopore and Illumina sequencing. The resulting data were used to assemble the aphids complete mitogenome. The mitogenome of C. fragaefolii is 16,108 bp in length and contains 2 rRNA, 13 protein-coding, and 22 tRNA genes (GenBank accession number LC590896). The mitogenome is similar in content and organization to other Aphididae. Phylogenetic analysis of the C. fragaefolii mitogenome resolved it in a fully supported clade in the tribe Macrosiphini. Analysis of the cox1 barcode sequence of C. fragaefolii from California found exact and nearly identical sequences to C. fragaefolii and Chaetosiphon thomasi Hille Ris Lambers, 1953, suggesting the two species are conspecific.

SUBMITTER: Acosta M 

PROVIDER: S-EPMC8291070 | biostudies-literature | 2021

REPOSITORIES: biostudies-literature

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The complete mitochondrial genome of the strawberry aphid <i>Chaetosiphon fragaefolii</i> Cockerell, 1901 (Hemiptera: Aphididae) from California, USA.

Acosta Miguel M   Alcantar Diana D   Alier-Reyes Ivan I   Alvarez Carlos C   Arroyo Crystal B CB   Calderon David D   Cardenas David D   Castro Alejandro R AR   Companion Janelle K JK   Constante Cristian C   Diaz Telles Evelyn S ES   Fletes Gabriel G   Gama Fatima C FC   Garcia Perez Celia C   Garcia Abigail A   Garcia Bailey B   Gutierrez Brandon S BS   Guzman Karina L KL   Hernandez Cecilia C   Hughey Jeffery R JR   Flores Monica Ibarra MI   Jacobo Adilene I AI   Lopez Brianna B   Lopez-De Leon Norma C NC   Martinez Jaden D JD   Mendoza Nayelli N   Perez Kimberly K   Perez Lucio J LJ   Perez-Moreno Milagros M   Pineda Caitlin D CD   Pinedo Elizabeth E   Portillo Julissa G JG   Rico Anais A   Ruiz Laura V LV   Serrano Genevie M GM   Sheldon Kalia M KM   Terada Hiroki H   Trujillo Victoria A VA   Vazquez-Ramos Clarissa C   Wang Frank F   Flora Dawn D   Zavala Felipe G FG  

Mitochondrial DNA. Part B, Resources 20210719 8

The aphid <i>Chaetosiphon fragaefolii</i> Cockerell, 1901 is an agricultural pest and known vector of strawberry viruses. To better understand its biology and systematics, we performed a genomic analysis on <i>C. fragaefolii</i> collected from Quinalt strawberry plants from Pacific Grove, Monterey county, California, USA using Oxford Nanopore and Illumina sequencing. The resulting data were used to assemble the aphids complete mitogenome. The mitogenome of <i>C. fragaefolii</i> is 16,108 bp in l  ...[more]

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