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Prospective pan-cancer germline testing using MSK-IMPACT informs clinical translation in 751 patients with pediatric solid tumors.


ABSTRACT: The spectrum of germline predisposition in pediatric cancer continues to be realized. Here we report 751 solid tumor patients who underwent prospective matched tumor-normal DNA sequencing and downstream clinical use (clinicaltrials.gov NCT01775072). Germline pathogenic and likely pathogenic (P/LP) variants were reported. One or more P/LP variants were found in 18% (138/751) of individuals when including variants in low, moderate, and high penetrance dominant or recessive genes, or 13% (99/751) in moderate and high penetrance dominant genes. 34% of high or moderate penetrance variants were unexpected based on the patient's diagnosis and previous history. 76% of patients with positive results completed a clinical genetics visit, and 21% had at least one relative undergo cascade testing as a result of this testing. Clinical actionability additionally included screening, risk reduction in relatives, reproductive use, and use of targeted therapies. Germline testing should be considered for all children with cancer.

SUBMITTER: Fiala EM 

PROVIDER: S-EPMC8294573 | biostudies-literature | 2021 Mar

REPOSITORIES: biostudies-literature

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Prospective pan-cancer germline testing using MSK-IMPACT informs clinical translation in 751 patients with pediatric solid tumors.

Fiala Elise M EM   Jayakumaran Gowtham G   Mauguen Audrey A   Kennedy Jennifer A JA   Bouvier Nancy N   Kemel Yelena Y   Fleischut Megan Harlan MH   Maio Anna A   Salo-Mullen Erin E EE   Sheehan Margaret M   Arnold Angela G AG   Latham Alicia A   Carlo Maria I MI   Cadoo Karen K   Murkherjee Semanti S   Slotkin Emily K EK   Trippett Tanya T   Glade Bender Julia J   Meyers Paul A PA   Wexler Leonard L   Dela Cruz Filemon S FS   Cheung Nai-Kong NK   Basu Ellen E   Kentsis Alex A   Ortiz Michael M   Francis Jasmine H JH   Dunkel Ira J IJ   Khakoo Yasmin Y   Gilheeney Stephen S   Farouk Sait Sameer S   Forlenza Christopher J CJ   Sulis Maria M   Karajannis Matthias M   Modak Shakeel S   Gerstle Justin T JT   Heaton Todd E TE   Roberts Stephen S   Yang Ciyu C   Jairam Sowmya S   Vijai Joseph J   Topka Sabine S   Friedman Danielle N DN   Stadler Zsofia K ZK   Robson Mark M   Berger Michael F MF   Schultz Nikolaus N   Ladanyi Marc M   O'Reilly Richard J RJ   Abramson David H DH   Ceyhan-Birsoy Ozge O   Zhang Liying L   Mandelker Diana D   Shukla Neerav N NN   Kung Andrew L AL   Offit Kenneth K   Zehir Ahmet A   Walsh Michael F MF  

Nature cancer 20210215


The spectrum of germline predisposition in pediatric cancer continues to be realized. Here we report 751 solid tumor patients who underwent prospective matched tumor-normal DNA sequencing and downstream clinical use (clinicaltrials.gov NCT01775072). Germline pathogenic and likely pathogenic (P/LP) variants were reported. One or more P/LP variants were found in 18% (138/751) of individuals when including variants in low, moderate, and high penetrance dominant or recessive genes, or 13% (99/751) i  ...[more]

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