Biological knowledge-slanted random forest approach for the classification of calcified aortic valve stenosis.

ABSTRACT:

Background

Calcific aortic valve stenosis (CAVS) is a fatal disease and there is no pharmacological treatment to prevent the progression of CAVS. This study aims to identify genes potentially implicated with CAVS in patients with congenital bicuspid aortic valve (BAV) and tricuspid aortic valve (TAV) in comparison with patients having normal valves, using a knowledge-slanted random forest (RF).

Results

This study implemented a knowledge-slanted random forest (RF) using information extracted from a protein-protein interactions network to rank genes in order to modify their selection probability to draw the candidate split-variables. A total of 15,191 genes were assessed in 19 valves with CAVS (BAV, n = 10; TAV, n = 9) and 8 normal valves. The performance of the model was eval

SUBMITTER: Cantor E 

PROVIDER: S-EPMC8305490 | biostudies-literature | 2021 Jul

REPOSITORIES: biostudies-literature