AniProtDB: A Collection of Consistently Generated Metazoan Proteomes for Comparative Genomics Studies.

ABSTRACT: To address the void in the availability of high-quality proteomic data traversing the animal tree, we have implemented a pipeline for generating de novo assemblies based on publicly available data from the NCBI Sequence Read Archive, yielding a comprehensive collection of proteomes from 100 species spanning 21 animal phyla. We have also created the Animal Proteome Database (AniProtDB), a resource providing open access to this collection of high-quality metazoan proteomes, along with information on predicted proteins and protein domains for each taxonomic classification and the ability to perform sequence similarity searches against all proteomes generated using this pipeline. This solution vastly increases the utility of these data by removing the barrier to access for research groups who

SUBMITTER: Barreira SN 

PROVIDER: S-EPMC8476134 | biostudies-literature | 2021 Sep

REPOSITORIES: biostudies-literature