12 Survival-related differentially expressed genes based on the TARGET-osteosarcoma database.

ABSTRACT: The Therapeutically Applicable Research to Generate Effective Treatments (TARGET) project aims to determine molecular changes that drive childhood cancers, including osteosarcoma. The main purpose of the program is to use the open-source database to develop novel, effective, and less toxic therapies. We downloaded TARGET-OS RNA-Sequencing data through R studio and merged the mRNA expression of genes with clinical information (vital status, survival time and gender). Further, we analyzed differential gene expressions between dead and alive patients based on TARGET-OS project. By this study, we found 5758 differentially expressed genes between deceased and alive patients with a false discovery rate below 0.05; 4469 genes were upregulated in deceased patients compared to alive, whereas 1289 g

SUBMITTER: Rothzerg E 

PROVIDER: S-EPMC8524768 | biostudies-literature | 2021 Oct

REPOSITORIES: biostudies-literature