At-C-RNA database, a one-stop source for information on circRNAs in Arabidopsis thaliana in a unified format.

ABSTRACT: Circular RNAs (circRNAs) are a large class of noncoding RNAs with functions that, in most cases, remain unknown. Recent genome-wide analysis of circRNAs using RNA-Seq has revealed that circRNAs are abundant and some of them conserved in plants. Furthermore, it has been shown that the expression of circRNAs in plants is regulated in a tissue-specific manner. Arabidopsis thaliana circular RNA database is a new resource designed to integrate and standardize the data available for circRNAs in a model plant A. thaliana, which is currently the best-characterized plant in terms of circRNAs. The resource integrates all applicable publicly available RNA-seq datasets. These datasets were subjected to extensive reanalysis and curation, yielding results in a unified format. Moreover, all data were nor

SUBMITTER: Nowis K 

PROVIDER: S-EPMC8594480 | biostudies-literature | 2021 Nov

REPOSITORIES: biostudies-literature