Building a reference transcriptome for Juniperus squamata (Cupressaceae) based on single-molecule real-time sequencing.

ABSTRACT:

Objectives

Cupressaceae is the second largest family of coniferous trees (Coniferopsida) with important economic and ecological values. However, like other conifers, the members of Cupressaceae have extremely large genome (> 8 gigabytes), which limited the researches of these taxa. A high-quality transcriptome is an important resource for gene discovery and annotation for non-model organisms.

Data description

Juniperus squamata, a tetraploid species which is widely distributed in Asian mountains, represents the largest genus, Juniperus, in Cupressaceae. Single-molecule real-time sequencing was used to obtain full-length transcriptome of Juniperus squamata. The full-length transcriptome was corrected with Illumina RNA-seq data from the same individual. A total of 47,860 non-r

SUBMITTER: Wang Y 

PROVIDER: S-EPMC8647495 | biostudies-literature | 2021 Dec

REPOSITORIES: biostudies-literature