Bacterial Community and Diversity from the Watermelon Cultivated Soils through Next Generation Sequencing Approach.

ABSTRACT: Knowledge and better understanding of functions of the microbial community are pivotal for crop management. This study was conducted to study bacterial structures including Acidovorax species community structures and diversity from the watermelon cultivated soils in different regions of South Korea. In this study, soil samples were collected from watermelon cultivation areas from various places of South Korea and microbiome analysis was performed to analyze bacterial communities including Acidovorax species community. Next generation sequencing (NGS) was performed by extracting genomic DNA from 92 soil samples from 8 different provinces using a fast genomic DNA extraction kit. NGS data analysis results revealed that, total, 39,367 operational taxonomic unit (OTU), were obtained. NGS data r

SUBMITTER: Adhikari M 

PROVIDER: S-EPMC8666237 | biostudies-literature | 2021 Dec

REPOSITORIES: biostudies-literature