Comparison of transcriptome between high- and low-marbling fineness in longissimus thoracis muscle of Korean cattle.

ABSTRACT:

Objective

This study compared differentially expressed genes (DEGs) between groups with high and low numbers of fine marbling particles (NFMP) in the longissimus thoracis muscle (LT) of Korean cattle to understand the molecular events associated with fine marbling particle formation.

Methods

The size and distribution of marbling particles in the LT were assessed with a computer image analysis method. Based on the NFMP, 10 LT samples were selected and assigned to either high- (n = 5) or low- (n = 5) NFMP groups. Using RNA sequencing, LT transcriptomic profiles were compared between the high- and low-NFMP groups. DEGs were selected at p<0.05 and |fold change| >2 and subjected to functional annotation.

Results

In total, 328 DEGs were identified, with 207 up-regulated and

SUBMITTER: Beak SH 

PROVIDER: S-EPMC8738949 | biostudies-literature | 2022 Feb

REPOSITORIES: biostudies-literature