MinoTour, real-time monitoring and analysis for nanopore sequencers.

ABSTRACT:

Summary

MinoTour offers a LIMS system for Oxford Nanopore Technology sequencers, with real-time metrics and analysis available permanently for review. Integration of unique real-time automated analysis can reduce the time required to answer biological questions, including mapping and classification of sequence whilst a run is in progress. Real-time sequence data requires new methods of analysis which do not wait for the completion of a run and MinoTour provides a framework to allow users to exploit these features.

Availability and implementation

Source code and documentation are available at https://github.com/LooseLab/minotourcli and https://github.com/LooseLab/minotourapp. Docker images are available from https://hub.docker.com/r/adoni5/, and can be installed using a preco

SUBMITTER: Munro R 

PROVIDER: S-EPMC8796371 | biostudies-literature | 2021 Nov

REPOSITORIES: biostudies-literature