VirStrain: a strain identification tool for RNA viruses.
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ABSTRACT:
SUBMITTER: Liao H
PROVIDER: S-EPMC8801933 | biostudies-literature | 2022 Jan
REPOSITORIES: biostudies-literature
Publications
VirStrain: a strain identification tool for RNA viruses.
Liao Herui H Cai Dehan D Sun Yanni Y
Genome biology 20220131 1
Viruses change constantly during replication, leading to high intra-species diversity. Although many changes are neutral or deleterious, some can confer on the virus different biological properties such as better adaptability. In addition, viral genotypes often have associated metadata, such as host residence, which can help with inferring viral transmission during pandemics. Thus, subspecies analysis can provide important insights into virus characterization. Here, we present VirStrain, a tool ...[more]
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