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PPM1D mutations are oncogenic drivers of de novo diffuse midline glioma formation.


ABSTRACT: The role of PPM1D mutations in de novo gliomagenesis has not been systematically explored. Here we analyze whole genome sequences of 170 pediatric high-grade gliomas and find that truncating mutations in PPM1D that increase the stability of its phosphatase are clonal driver events in 11% of Diffuse Midline Gliomas (DMGs) and are enriched in primary pontine tumors. Through the development of DMG mouse models, we show that PPM1D mutations potentiate gliomagenesis and that PPM1D phosphatase activity is required for in vivo oncogenesis. Finally, we apply integrative phosphoproteomic and functional genomics assays and find that oncogenic effects of PPM1D truncation converge on regulators of cell cycle, DNA damage response, and p53 pathways, revealing therapeutic vulnerabilities including MDM2 inhibition.

SUBMITTER: Khadka P 

PROVIDER: S-EPMC8807747 | biostudies-literature | 2022 Feb

REPOSITORIES: biostudies-literature

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PPM1D mutations are oncogenic drivers of de novo diffuse midline glioma formation.

Khadka Prasidda P   Reitman Zachary J ZJ   Lu Sophie S   Buchan Graham G   Gionet Gabrielle G   Dubois Frank F   Carvalho Diana M DM   Shih Juliann J   Zhang Shu S   Greenwald Noah F NF   Zack Travis T   Shapira Ofer O   Pelton Kristine K   Hartley Rachel R   Bear Heather H   Georgis Yohanna Y   Jarmale Spandana S   Melanson Randy R   Bonanno Kevin K   Schoolcraft Kathleen K   Miller Peter G PG   Condurat Alexandra L AL   Gonzalez Elizabeth M EM   Qian Kenin K   Morin Eric E   Langhnoja Jaldeep J   Lupien Leslie E LE   Rendo Veronica V   Digiacomo Jeromy J   Wang Dayle D   Zhou Kevin K   Kumbhani Rushil R   Guerra Garcia Maria E ME   Sinai Claire E CE   Becker Sarah S   Schneider Rachel R   Vogelzang Jayne J   Krug Karsten K   Goodale Amy A   Abid Tanaz T   Kalani Zohra Z   Piccioni Federica F   Beroukhim Rameen R   Persky Nicole S NS   Root David E DE   Carcaboso Angel M AM   Ebert Benjamin L BL   Fuller Christine C   Babur Ozgun O   Kieran Mark W MW   Jones Chris C   Keshishian Hasmik H   Ligon Keith L KL   Carr Steven A SA   Phoenix Timothy N TN   Bandopadhayay Pratiti P  

Nature communications 20220201 1


The role of PPM1D mutations in de novo gliomagenesis has not been systematically explored. Here we analyze whole genome sequences of 170 pediatric high-grade gliomas and find that truncating mutations in PPM1D that increase the stability of its phosphatase are clonal driver events in 11% of Diffuse Midline Gliomas (DMGs) and are enriched in primary pontine tumors. Through the development of DMG mouse models, we show that PPM1D mutations potentiate gliomagenesis and that PPM1D phosphatase activit  ...[more]

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