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Structural changes in the SARS-CoV-2 spike E406W mutant escaping a clinical monoclonal antibody cocktail.


ABSTRACT: The SARS-CoV-2 receptor-binding domain (RBD) E406W mutation abrogates neutralization mediated by the REGEN-CoV therapeutic monoclonal antibody (mAb) COVID-19 cocktail and the cilgavimab (AZD1061) mAb. Here, we show that this residue substitution remodels the ACE2-binding site allosterically, thereby dampening receptor recognition severely and altering the epitopes recognized by these three mAbs. Although vaccine-elicited neutralizing antibody titers are decreased similarly against the E406 mutant and the Delta or Epsilon variants, broadly neutralizing sarbecovirus mAbs, including a clinical mAb, inhibit the E406W spike mutant.

SUBMITTER: Addetia A 

PROVIDER: S-EPMC8811904 | biostudies-literature | 2022 Jan

REPOSITORIES: biostudies-literature

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Structural changes in the SARS-CoV-2 spike E406W mutant escaping a clinical monoclonal antibody cocktail.

Addetia Amin A   Park Young-Jun YJ   Starr Tyler T   Greaney Allison J AJ   Sprouse Kaitlin R KR   Bowen John E JE   Tiles Sasha W SW   Van Voorhis Wesley C WC   Bloom Jesse D JD   Corti Davide D   Walls Alexandra C AC   Veesler David D  

bioRxiv : the preprint server for biology 20220125


The SARS-CoV-2 receptor-binding domain (RBD) E406W mutation abrogates neutralization mediated by the REGEN-CoV therapeutic monoclonal antibody (mAb) COVID-19 cocktail and the cilgavimab (AZD1061) mAb. Here, we show that this residue substitution remodels the ACE2-binding site allosterically, thereby dampening receptor recognition severely and altering the epitopes recognized by these three mAbs. Although vaccine-elicited neutralizing antibody titers are decreased similarly against the E406 mutan  ...[more]

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