Generation of Peptides for Highly Efficient Proximity Utilizing Site-Specific Biotinylation in Cells.

ABSTRACT: Protein tags are peptide sequences genetically embedded into a recombinant protein for various purposes, such as affinity purification, Western blotting, and immunofluorescence. Another recent application of peptide tags is in vivo labeling and analysis of protein-protein interactions (PPI) by proteomics methods. One of the common workflows involves site-specific in vivo biotinylation of an AviTag-fused protein in the presence of the biotin ligase BirA. However, due to the rapid kinetics of labeling, this tag is not ideal for analysis of PPI. Here we describe the rationale, design, and protocol for the new biotin acceptor peptides BAP1070 and BAP1108 using modular assembling of biotin acceptor fragments, DNA sequencing, transient expression of proteins in cells, and Western blotting method

SUBMITTER: Kulyyassov A 

PROVIDER: S-EPMC8875956 | biostudies-literature | 2022 Feb

REPOSITORIES: biostudies-literature