Unknown

Dataset Information

0

Characterization of the novel heterozygous SCN5A genetic variant Y739D associated with Brugada syndrome.


ABSTRACT: Genetic variants in SCN5A gene were identified in patients with various arrhythmogenic conditions including Brugada syndrome. Despite significant progress of last decades in studying the molecular mechanism of arrhythmia-associated SCN5A mutations, the understanding of relationship between genetics, electrophysiological consequences and clinical phenotype is lacking. We have found a novel genetic variant Y739D in the SCN5A-encoded sodium channel Nav1.5 of a male patient with Brugada syndrome (BrS). The objective of the study was to characterize the biophysical properties of Nav1.5-Y739D and provide possible explanation of the phenotype observed in the patient. The WT and Y739D channels were heterologously expressed in the HEK-293T cells and the whole-cell sodium currents were recorded. Substitution Y739D reduced the sodium current density by 47 ± 2% at -20 mV, positively shifted voltage-dependent activation, accelerated both fast and slow inactivation, and decelerated recovery from the slow inactivation. The Y739D loss-of-function phenotype likely causes the BrS manifestation. In the hNav1.5 homology models, which are based on the cryo-EM structure of rat Nav1.5 channel, Y739 in the extracellular loop IIS1-S2 forms H-bonds with K1381 and E1435 and pi-cation contacts with K1397 (all in loop IIIS5-P1). In contrast, Y739D accepts H-bonds from K1397 and Y1434. Substantially different contacts of Y739 and Y739D with loop IIIS5-P1 would differently transmit allosteric signals from VSD-II to the fast-inactivation gate at the N-end of helix IIIS5 and slow-inactivation gate at the C-end of helix IIIP1. This may underlie the atomic mechanism of the Y739D channel dysfunction.

SUBMITTER: Zaytseva AK 

PROVIDER: S-EPMC8920867 | biostudies-literature | 2022 Jul

REPOSITORIES: biostudies-literature

altmetric image

Publications

Characterization of the novel heterozygous <i>SCN5A</i> genetic variant Y739D associated with Brugada syndrome.

Zaytseva Anastasia K AK   Kiselev Artem M AM   Boitsov Alexander S AS   Fomicheva Yulia V YV   Pavlov Georgii S GS   Zhorov Boris S BS   Kostareva Anna A AA  

Biochemistry and biophysics reports 20220311


Genetic variants in <i>SCN5A</i> gene were identified in patients with various arrhythmogenic conditions including Brugada syndrome. Despite significant progress of last decades in studying the molecular mechanism of arrhythmia-associated <i>SCN5A</i> mutations, the understanding of relationship between genetics, electrophysiological consequences and clinical phenotype is lacking. We have found a novel genetic variant Y739D in the <i>SCN5A-</i>encoded sodium channel Na<sub>v</sub>1.5 of a male p  ...[more]

Similar Datasets

| S-EPMC5669154 | biostudies-literature
| S-EPMC11844247 | biostudies-literature
| S-EPMC10406612 | biostudies-literature
| S-EPMC8234720 | biostudies-literature
| S-EPMC10606416 | biostudies-literature
| S-EPMC4999187 | biostudies-literature
| S-EPMC8195286 | biostudies-literature
| S-EPMC3805610 | biostudies-literature
| S-EPMC4878676 | biostudies-literature
| S-EPMC3410911 | biostudies-other