Full-length transcriptome sequencing reveals the molecular mechanism of potato seedlings responding to low-temperature.

ABSTRACT:

Background

Potato (Solanum tuberosum L.) is one of the world's most important crops, the cultivated potato is frost-sensitive, and low-temperature severely influences potato production. However, the mechanism by which potato responds to low-temperature stress is unclear. In this research, we apply a combination of second-generation sequencing and third-generation sequencing technologies to sequence full-length transcriptomes in low-temperature-sensitive cultivars to identify the important genes and main pathways related to low-temperature resistance.

Results

In this study, we obtained 41,016 high-quality transcripts, which included 15,189 putative new transcripts. Amongst them, we identified 11,665 open reading frames, 6085 simple sequence repeats out of the potato dataset.

SUBMITTER: Yan C 

PROVIDER: S-EPMC8932150 | biostudies-literature | 2022 Mar

REPOSITORIES: biostudies-literature