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Value and prognostic impact of a deep learning segmentation model of COVID-19 lung lesions on low-dose chest CT.


ABSTRACT:

Objectives

1) To develop a deep learning (DL) pipeline allowing quantification of COVID-19 pulmonary lesions on low-dose computed tomography (LDCT). 2) To assess the prognostic value of DL-driven lesion quantification.

Methods

This monocentric retrospective study included training and test datasets taken from 144 and 30 patients, respectively. The reference was the manual segmentation of 3 labels: normal lung, ground-glass opacity(GGO) and consolidation(Cons). Model performance was evaluated with technical metrics, disease volume and extent. Intra- and interobserver agreement were recorded. The prognostic value of DL-driven disease extent was assessed in 1621 distinct patients using C-statistics. The end point was a combined outcome defined as death, hospitalization>10 days, intensive care unit hospitalization or oxygen therapy.

Results

The Dice coefficients for lesion (GGO+Cons) segmentations were 0.75±0.08, exceeding the values for human interobserver (0.70±0.08; 0.70±0.10) and intraobserver measures (0.72±0.09). DL-driven lesion quantification had a stronger correlation with the reference than inter- or intraobserver measures. After stepwise selection and adjustment for clinical characteristics, quantification significantly increased the prognostic accuracy of the model (0.82 vs. 0.90; p<0.0001).

Conclusions

A DL-driven model can provide reproducible and accurate segmentation of COVID-19 lesions on LDCT. Automatic lesion quantification has independent prognostic value for the identification of high-risk patients.

SUBMITTER: Bartoli A 

PROVIDER: S-EPMC8939894 | biostudies-literature | 2022 Mar

REPOSITORIES: biostudies-literature

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Publications

Value and prognostic impact of a deep learning segmentation model of COVID-19 lung lesions on low-dose chest CT.

Bartoli Axel A   Fournel Joris J   Maurin Arnaud A   Marchi Baptiste B   Habert Paul P   Castelli Maxime M   Gaubert Jean-Yves JY   Cortaredona Sebastien S   Lagier Jean-Christophe JC   Million Matthieu M   Raoult Didier D   Ghattas Badih B   Jacquier Alexis A  

Research in diagnostic and interventional imaging 20220322


<h4>Objectives</h4>1) To develop a deep learning (DL) pipeline allowing quantification of COVID-19 pulmonary lesions on low-dose computed tomography (LDCT). 2) To assess the prognostic value of DL-driven lesion quantification.<h4>Methods</h4>This monocentric retrospective study included training and test datasets taken from 144 and 30 patients, respectively. The reference was the manual segmentation of 3 labels: normal lung, ground-glass opacity(GGO) and consolidation(Cons). Model performance wa  ...[more]

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