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Characterization of the complete mitochondrial genome of Laomedia astacina De Haan, 1841 (Decapoda: Laomediidae) and its phylogenetic implications.


ABSTRACT: In this study, we determined the complete mitochondrial genome (mitogenome) of Laomedia astacina De Haan, 1841 using next-generation sequencing technology. The total length of the mitogenome sequence of L. astacina is 14,795 base pairs, including 13 protein-coding genes (PCGs), 22 transfer RNA genes, and two ribosomal RNA genes. The overall composition of the mitogenome is estimated to be 35.3% A, 38.0% T, 13.8% C, and 12.9% G, indicating that the L. astacina mitogenome is rich in A + T (73.3%). The phylogenetic relationships of 13 decapod species were constructed based on the 13 PCGs by the maximum-likelihood approach using IQtree software.

SUBMITTER: Guo D 

PROVIDER: S-EPMC8956301 | biostudies-literature | 2022

REPOSITORIES: biostudies-literature

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Characterization of the complete mitochondrial genome of <i>Laomedia astacina</i> De Haan, 1841 (Decapoda: Laomediidae) and its phylogenetic implications.

Guo Dong D   Zhang Dandan D   Tu Zhong Z   Song Lun L   Dong Jing J   Wang Weikuang W  

Mitochondrial DNA. Part B, Resources 20220322 3


In this study, we determined the complete mitochondrial genome (mitogenome) of <i>Laomedia astacina</i> De Haan, 1841 using next-generation sequencing technology. The total length of the mitogenome sequence of <i>L. astacina</i> is 14,795 base pairs, including 13 protein-coding genes (PCGs), 22 transfer RNA genes, and two ribosomal RNA genes. The overall composition of the mitogenome is estimated to be 35.3% A, 38.0% T, 13.8% C, and 12.9% G, indicating that the <i>L. astacina</i> mitogenome is r  ...[more]

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