Transcriptomic and proteomic data provide new insights into cold-treated potato tubers with T- and D-type cytoplasm.

ABSTRACT:

Main conclusion

Tuber-omics in potato with the T- and D-types of cytoplasm showed different sets of differentially expressed genes and proteins in response to cold storage. For the first time, we report differences in gene and protein expression in potato (Solanum tuberosum L.) tubers possessing the T- or D-type cytoplasm. Two F1 diploid reciprocal populations, referred to as T and D, were used. The pooling strategy was applied for detection of differentially expressed genes (DEGs) and differentially expressed proteins (DEPs) in tubers consisting of extreme chip colour after cold storage. RNA and protein bulks were constructed from contrasting phenotypes. We recognized 48 and 15 DEGs for the T and D progenies, respectively. DEPs were identified in the amyloplast and mitochondrial f

SUBMITTER: Szajko K 

PROVIDER: S-EPMC8983635 | biostudies-literature | 2022 Apr

REPOSITORIES: biostudies-literature