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Programmable Cell-Free Transcriptional Switches for Antibody Detection.


ABSTRACT: We report here the development of a cell-free in vitro transcription system for the detection of specific target antibodies. The approach is based on the use of programmable antigen-conjugated DNA-based conformational switches that, upon binding to a target antibody, can trigger the cell-free transcription of a light-up fluorescence-activating RNA aptamer. The system couples the unique programmability and responsiveness of DNA-based systems with the specificity and sensitivity offered by in vitro genetic circuitries and commercially available transcription kits. We demonstrate that cell-free transcriptional switches can efficiently measure antibody levels directly in blood serum. Thanks to the programmable nature of the sensing platform, the method can be adapted to different antibodies: we demonstrate here the sensitive, rapid, and cost-effective detection of three different antibodies and the possible use of this approach for the simultaneous detection of two antibodies in the same solution.

SUBMITTER: Patino Diaz A 

PROVIDER: S-EPMC8990998 | biostudies-literature | 2022 Apr

REPOSITORIES: biostudies-literature

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Programmable Cell-Free Transcriptional Switches for Antibody Detection.

Patino Diaz Aitor A   Bracaglia Sara S   Ranallo Simona S   Patino Tania T   Porchetta Alessandro A   Ricci Francesco F  

Journal of the American Chemical Society 20220322 13


We report here the development of a cell-free <i>in vitro</i> transcription system for the detection of specific target antibodies. The approach is based on the use of programmable antigen-conjugated DNA-based conformational switches that, upon binding to a target antibody, can trigger the cell-free transcription of a light-up fluorescence-activating RNA aptamer. The system couples the unique programmability and responsiveness of DNA-based systems with the specificity and sensitivity offered by  ...[more]

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