Computational characterization and analysis of molecular sequence data of Elizabethkingia meningoseptica.

ABSTRACT:

Objective

Elizabethkingia meningoseptica is a multidrug resistance strain which primarily causes meningitis in neonates and immunocompromised patients. Being a nosocomial infection causing agent, less information is available in literature, specifically, about its genomic makeup and associated features. An attempt is made to study them through bioinformatics tools with respect to compositions, embedded periodicities, open reading frames, origin of replication, phylogeny, orthologous gene clusters analysis and pathways.

Results

Complete DNA and protein sequence pertaining to E. meningoseptica were thoroughly analyzed as part of the study. E. meningoseptica G4076 genome showed 7593 ORFs it is GC rich. Fourier based analysis showed the presence of typical three base periodicity

SUBMITTER: Girdhar N 

PROVIDER: S-EPMC8994065 | biostudies-literature | 2022 Apr

REPOSITORIES: biostudies-literature