Full-Length Transcriptome Analysis of the Halophyte Nitraria sibirica Pall.

ABSTRACT:

Background

Nitraria sibirica Pall. is one of the pioneer tree species in saline-alkali areas due to its extreme salt tolerance. However, the lack of information on its genome limits the further exploration of the molecular mechanisms in N. sibirica under salt stress.

Methods

In this study, we used single-molecule real-time (SMRT) technology based on the PacBio Iso-Seq platform to obtain transcriptome data from N. sibirica under salt treatment for the first time, which is helpful for our in-depth analysis of the salt tolerance and molecular characteristics of N. sibirica.

Results

Our results suggested that a total of 234,508 circular consensus sequences (CCSs) with a mean read length of 2121 bp were obtained from the 19.26 Gb raw data. Furth

SUBMITTER: Zhang H 

PROVIDER: S-EPMC9032868 | biostudies-literature | 2022 Apr

REPOSITORIES: biostudies-literature