Dataset Information

A phylogeny of the Triraphideae including Habrochloa and Nematopoa (Poaceae, Chloridoideae).

ABSTRACT: To investigate the evolutionary relationships among species of the tribe Triraphideae (including two monotypic genera, Habrochloa and Nematopoa), we generated a phylogeny based on DNA sequences from nuclear ribosomal (ITS) and four plastid markers (rps16-trnK, rps16 intron, rpl32-trnL, and ndhA intron). Habrochloa and Nematopoa form a clade that is sister to Neyraudia and Triraphis. Member of the Triraphideae have paniculate inflorescences, 3-veined, marginally ciliate lemmas, usually with hairy lateral veins, that are apically bifid and awned from between a sinus. A description of the Triraphideae and key to the genera is provided, and the biogeography is discussed, likely originating in Africa.

SUBMITTER: Peterson PM

PROVIDER: S-EPMC9038846 | biostudies-literature | 2022

REPOSITORIES: biostudies-literature

ACCESS DATA

Publications

A phylogeny of the Triraphideae including Habrochloa and Nematopoa (Poaceae, Chloridoideae).

Peterson Paul M PM Romaschenko Konstantin K Arrieta Yolanda Herrera YH

PhytoKeys 20220418

To investigate the evolutionary relationships among species of the tribe Triraphideae (including two monotypic genera, Habrochloa and Nematopoa), we generated a phylogeny based on DNA sequences from nuclear ribosomal (ITS) and four plastid markers (rps16-trnK, rps16 intron, rpl32-trnL, and ndhA intron). Habrochloa and Nematopoa form a clade that is sister to Neyraudia and Triraphis. Member of the Triraphideae have paniculate i ...[more]

PMID: 35586318

Similar Datasets

Project description:Diplachne P. Beauv. comprises two species with C4 (NAD-ME) photosynthesis. Diplachne fusca has a nearly pantropical-pantemperate distribution with four subspecies: D. fusca subsp. fusca is Paleotropical with native distributions in Africa, southern Asia and Australia; the widespread Australian endemic D. f. subsp. muelleri; and D. f. subsp. fascicularis and D. f. subsp. uninervia occurring in the New World. Diplachne gigantea is known from a few widely scattered, older collections in east-central and southern Africa, and although Data Deficient clearly is of conservation concern. A discussion of previous taxonomic treatments is provided, including molecular data supporting Diplachne in its newer, restricted sense. Many populations of Diplachne fusca are highly tolerant of saline substrates and most prefer seasonally moist to saturated soils, often in disturbed areas. Some populations of Diplachne fusca in southern Asia combine nitrogen-fixation, high salinity tolerance and palatibilty to livestock, which should be pursued with further research for purposes of soil reclamation. Diplachne fusca subsp. uninervia is the most invasive of the subspecies and is becoming weedy in some non-native areas, including in the Old World. This monograph provides detailed descriptions of all taxa, a key to the species and subspecies, geographic distributions and information on the anatomy of leaves, stems, lemmatal micromorphology and discussions of the chromosome numbers. Lectotypes are designated for: Atropis carinata Grisb.; Diplachne acuminata Nash; Diplachne capensis (Nees) Nees var. concinna Nees; Diplachne capensis (Nees) Nees var. obscura Nees, Diplachne capensis (Nees) Nees var. prolifera subvar. minor Nees, Diplachne halei Nash, Diplachne maritima E.P. Bicknel, Diplachne muelleri Benth., Diplachne reverchonii Vasey, Diplachne tectoneticola Backer, Leptochloa imbricata Thurb., Leptochloa neuroglossa Peter, Leptochloa uninervia var. typica fo. abbreviata Parodi, Triodia ambigua R. Br. and Triodia parviflora R. Br.

Project description:Chloridoideae is one of the largest subfamilies of Poaceae, containing many species of great economic and ecological value; however, phylogenetic relationships among the subtribes and genera of Cynodonteae are controversial. In the present study, we combined 111 plastomes representing all five tribes, including 25 newly sequenced plastomes that are mostly from Cynodonteae. Phylogenetic analyses supported the five monophyletic tribes of Chloridoideae, including Centropodieae, Triraphideae, Eragrostideae, Zoysieae and Cynodonteae. Simultaneously, nine monophyletic lineages were revealed in Cynodonteae: supersubtribe Boutelouodinae, subtribes Tripogoninae, Aeluropodinae, Eleusininae, Dactylocteniinae, supersubtribe Gouiniodinae, Cleistogenes and Orinus, and subtribe Triodiinae. Within the tribe of Cynodonteae, the basal lineage is supersubtribe Boutelouodinae and Tripogoninae is sister to the remaining lineages. The clade formed of Aeluropodinae and Eleusininae is sister to the clade composed of Dactylocteniinae, supersubtribe Gouiniodinae, Cleistogenes and Orinus, and subtribe Triodiinae. The clade comprising Dactylocteniinae and supersubtribe Gouiniodinae is sister to the clade comprising Cleistogenes, Orinus, and Triodiinae. Acrachne is a genus within Eleusininae but not within Dactylocteniinae. Molecular evidence determined that Diplachne is not clustered with Leptochloa, which indicated that Diplachne should not be combined into Leptochloa. Cleistogenes is sister to a clade composed of Orinus and Triodia, whereas the recently proposed subtribe Orininae was not supported. Cynodonteae was estimated to have experienced rapid divergence within a short period, which could be a major obstacle in resolving its phylogenetic relationships. Ancestral state reconstructions of morphological characters showed that the most recent common ancestor (MRCA) of Chloridoideae has a panicle, multiple florets in each spikelet, the peaked type of stomatal subsidiary cells, and a saddle-shaped phytoliths, while the ancestral morphological characters of Cynodonteae are the panicle, peaked type of stomatal subsidiary cells, sharp-cap cell typed and equal-base-cell microhair, and square-shaped phytoliths. Overall, plastome phylogenomics provides new insights into the phylogenetic relationships and morphological character evolution of Chloridoideae.

Dataset Information

A phylogeny of the Triraphideae including Habrochloa and Nematopoa (Poaceae, Chloridoideae).

Publications

A phylogeny of the Triraphideae including <i>Habrochloa</i> and <i>Nematopoa</i> (Poaceae, Chloridoideae).

Similar Datasets

OmicsDI is part of the ELIXIR infrastructure

Tweets

Dataset Information

A phylogeny of the Triraphideae including Habrochloa and Nematopoa (Poaceae, Chloridoideae).

Publications

﻿A phylogeny of the Triraphideae including <i>Habrochloa</i> and <i>Nematopoa</i> (Poaceae, Chloridoideae).

Similar Datasets

OmicsDI is part of the ELIXIR infrastructure

Tweets

A phylogeny of the Triraphideae including <i>Habrochloa</i> and <i>Nematopoa</i> (Poaceae, Chloridoideae).