The Biodiversity of Grapevine Bacterial Endophytes of Vitis amurensis Rupr.

ABSTRACT: In this paper, the composition profiles of bacterial endophytes in wild-growing Amur grape Vitis amurensis Rupr. grown in the south of the Russian Far East were analyzed using both a cultivation-dependent (sowing bacteria) and a cultivation-independent (next generation sequencing, NGS) approach. Both methods revealed the prevalent endophytes in V. amurensis were represented by Gammaproteobacteria-40.3-75.8%, Alphaproteobacteria-8.6-18.7%, Actinobacteria-9.2-15.4%, and Bacilli-6.1-6.6%. NGS also showed a large proportion of Bacteroidia (12.2%) and a small proportion of other classes (less than 5.7%). In general, NGS revealed a greater variety of classes and genera in the endophytic bacterial community due to a high number of reads (574,207) i

SUBMITTER: Aleynova OA 

PROVIDER: S-EPMC9099740 | biostudies-literature | 2022 Apr

REPOSITORIES: biostudies-literature