Data-dependent visualization of biological networks in the web-browser with NDExEdit.

ABSTRACT: Networks are a common methodology used to capture increasingly complex associations between biological entities. They serve as a resource of biological knowledge for bioinformatics analyses, and also comprise the subsequent results. However, the interpretation of biological networks is challenging and requires suitable visualizations dependent on the contained information. The most prominent software in the field for the visualization of biological networks is Cytoscape, a desktop modeling environment also including many features for analysis. A further challenge when working with networks is their distribution. Within a typical collaborative workflow, even slight changes of the network data force one to repeat the visualization step as well. Also, just minor adjustments to the visual repr

SUBMITTER: Auer F 

PROVIDER: S-EPMC9212158 | biostudies-literature | 2022 Jun

REPOSITORIES: biostudies-literature