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Search and sequence analysis tools services from EMBL-EBI in 2022.

ABSTRACT: The EMBL-EBI search and sequence analysis tools frameworks provide integrated access to EMBL-EBI's data resources and core bioinformatics analytical tools. EBI Search (https://www.ebi.ac.uk/ebisearch) provides a full-text search engine across nearly 5 billion entries, while the Job Dispatcher tools framework (https://www.ebi.ac.uk/services) enables the scientific community to perform a diverse range of sequence analysis using popular bioinformatics applications. Both allow users to interact through user-friendly web applications, as well as via RESTful and SOAP-based APIs. Here, we describe recent improvements to these services and updates made to accommodate the increasing data requirements during the COVID-19 pandemic.

SUBMITTER: Madeira F

PROVIDER: S-EPMC9252731 | biostudies-literature | 2022 Apr

REPOSITORIES: biostudies-literature

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Search and sequence analysis tools services from EMBL-EBI in 2022.

Madeira Fábio F Pearce Matt M Tivey Adrian R N ARN Basutkar Prasad P Lee Joon J Edbali Ossama O Madhusoodanan Nandana N Kolesnikov Anton A Lopez Rodrigo R

Nucleic acids research 20220701 W1

The EMBL-EBI search and sequence analysis tools frameworks provide integrated access to EMBL-EBI's data resources and core bioinformatics analytical tools. EBI Search (https://www.ebi.ac.uk/ebisearch) provides a full-text search engine across nearly 5 billion entries, while the Job Dispatcher tools framework (https://www.ebi.ac.uk/services) enables the scientific community to perform a diverse range of sequence analysis using popular bioinformatics applications. Both allow users to interact thro ...[more]

PMID: 35412617

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