OrthoQuantum: visualizing evolutionary repertoire of eukaryotic proteins.

ABSTRACT: Extensive amounts of data from next-generation sequencing and omics studies have led to the accumulation of information that provides insight into the evolutionary landscape of related proteins. Here, we present OrthoQuantum, a web server that allows for time-efficient analysis and visualization of phylogenetic profiles of any set of eukaryotic proteins. It is a simple-to-use tool capable of searching large input sets of proteins. Using data from open source databases of orthologous sequences in a wide range of taxonomic groups, it enables users to assess coupled evolutionary patterns and helps define lineage-specific innovations. The web interface allows to perform queries with gene names and UniProt identifiers in different phylogenetic clades and supplement presence with an additional B

SUBMITTER: Ilnitskiy IS 

PROVIDER: S-EPMC9252792 | biostudies-literature | 2022 May

REPOSITORIES: biostudies-literature