Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Draft Genome Sequence of Trichomonas tenax Strain Hs-4:NIH.

ABSTRACT: Trichomonas tenax is a flagellated parasite that plays an important role in periodontal disease, with high prevalence worldwide. Its pathogenesis remains largely unknown, and there is very little information on its genome. Here, we present the whole-genome shotgun sequence of T. tenax strain Hs-4:NIH.

SUBMITTER: Yang N

PROVIDER: S-EPMC9302087 | biostudies-literature | 2022 Jul

REPOSITORIES: biostudies-literature

ACCESS DATA

Json Xml

Publications

Draft Genome Sequence of <i>Trichomonas tenax</i> Strain Hs-4:NIH.

Yang Nawu N Christie Jevan J Keen Henry L HL Matthew Maurice A MA Yao Chaoqun C

Microbiology resource announcements 20220616 7

<i>Trichomonas tenax</i> is a flagellated parasite that plays an important role in periodontal disease, with high prevalence worldwide. Its pathogenesis remains largely unknown, and there is very little information on its genome. Here, we present the whole-genome shotgun sequence of T. tenax strain Hs-4:NIH. ...[more]

PMID: 35861552

Similar Datasets

Trichomonas tenax strain:Hs-4:NIH

Project description:Whole Genome Sequencing of Trichomonas tenax

| PRJNA797354 | ENA

Draft genome sequence of the sexually transmitted pathogen Trichomonas vaginalis.

Project description:We describe the genome sequence of the protist Trichomonas vaginalis, a sexually transmitted human pathogen. Repeats and transposable elements comprise about two-thirds of the approximately 160-megabase genome, reflecting a recent massive expansion of genetic material. This expansion, in conjunction with the shaping of metabolic pathways that likely transpired through lateral gene transfer from bacteria, and amplification of specific gene families implicated in pathogenesis and phagocytosis of host proteins may exemplify adaptations of the parasite during its transition to a urogenital environment. The genome sequence predicts previously unknown functions for the hydrogenosome, which support a common evolutionary origin of this unusual organelle with mitochondria.

| S-EPMC2080659 | biostudies-literature

Trichomonas tenax

Project description:Trichomonas tenax Transcriptome or Gene expression

| PRJNA353893 | ENA

Trichomonas tenax

Project description:Trichomonas tenax overview

| PRJNA797496 | ENA

Canine Trichomonas tenax mandibular gland infestation.

Project description:BackgroundSeveral species of trichomonads are intestinal or urogenital parasites of humans and animals, with only a few species typically being located in the oral cavity. The prevalence of oral trichomoniasis in dogs is approximately 15-25 %, although the prevalence varies among different populations and depends on age, sex and the health of the oral cavity.Case presentationA case of mandibular gland infestation by trichomonads in a 13-year-old female Dachshund with advanced periodontal disease and oral trichomoniasis is reported. The dog was referred due to a history of a painless swelling over the left submandibular region that increased in size over time. Based on physical and ultrasound examinations, a final diagnosis of mandibular gland cyst was established and transcutaneous needle aspiration was carried out. Numerous mobile trophozoites of trichomonads were found by microscopy and culturing for trichomonas was performed. The species was finally characterized as Trichomonas tenax by polymerase chain reaction and sequencing.ConclusionsStudies have shown that T. tenax can be found in humans in atypical locations such as the salivary glands and upper and lower respiratory tracts. According to our knowledge this is the first report of T. tenax being present in the salivary glands of a dog. Because of the relatively high prevalence of trichomoniasis in dogs with periodontal diseases, these parasites should be considered together with bacterial and viral agents in salivary gland infections, especially in individuals with compromised oral health.

| S-EPMC4758000 | biostudies-literature

Draft genome sequence of Tsukamurella sp. strain 1534.

Project description:A draft genome sequence of Tsukamurella sp., an aerobic bacterium isolated from a human sputum specimen, is described here. A new virus or provirus, TPA4, was characterized.

| S-EPMC3457207 | biostudies-other

Draft Genome Sequence of Necropsobacter rosorum Strain P709T.

Project description:Necropsobacter is a recently described genus that contains a single species, N. rosorum, and belongs to the family Pasteurellaceae. Here, we present the draft genome of N. rosorum strain P709(T), which is the first genome sequence from this species.

| S-EPMC4192374 | biostudies-other

Draft Genome Sequence of Geobacillus thermoleovorans Strain B23.

Project description:Here, we report the draft genome sequence of Geobacillus thermoleovorans strain B23, which was isolated from a deep subterranean petroleum reservoir in Japan. An array of genes related to unique long-chain alkane degradation pathways in G. thermoleovorans B23 has been identified by whole-genome analyses of this strain.

| S-EPMC3828315 | biostudies-other

Draft Genome Sequence of Riemerella anatipestifer Strain xi1.

Project description:Riemerella anatipestifer is an important bacterial pathogen associated with epizootic infections in waterfowl and various other birds. The complete genome sequence of Riemerella anatipestifer xi1, isolated in China, was sequenced. The genome consisted of 2,062,911 bp carrying 1,879 predicted genes.

| S-EPMC9022536 | biostudies-literature

Draft-genome sequence of Shewanella algae strain C6G3.

Project description:Shewanella algae strain C6G3, isolated from the 2 uppermost centimeters of muddy sediment of Arcachon Bay (SW Atlantic French coast, sampled in October 2007) has the capability to use a large panel of terminal electron acceptors under anaerobic condition, such as nitrate, nitrite and metal-oxide, and presents a great metabolic versatility. Here, we present the non-contiguous draft-genome sequence of Shewanella algae C6G3, which consists of a 4,879,425 bp. The chromosome contains 5792 predicted genes. In total, the genome consists of 24 rRNA genes, 86 tRNA genes and 5660 genes assigned as protein-coding genes.

| S-EPMC4572631 | biostudies-literature

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data