Isotope Calculation Gadgets: A Series of Software for Isotope-Tracing Experiments in Garuda Platform.

ABSTRACT: Isotope tracing is a powerful technique for elucidating intracellular metabolism. Experiments utilizing this technique involve various processes, such as the correction of natural isotopes. Although some previously developed software are available for these procedures, there are still time-consuming steps in isotope tracing including the creation of an isotope measurement method in mass spectrometry (MS) and the interpretation of obtained labeling data. Additionally, these multi-step tasks often require data format conversion, which is also time-consuming. In this study, the Isotope Calculation Gadgets, a series of software that supports an entire workflow of isotope-tracing experiments, was developed in the Garuda platform, an open community. Garuda is a graphical user interface-based pla

SUBMITTER: Okahashi N 

PROVIDER: S-EPMC9318330 | biostudies-literature | 2022 Jul

REPOSITORIES: biostudies-literature