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Recent advances on phylogenomics of gymnosperms and a new classification.


ABSTRACT: Living gymnosperms comprise four major groups: cycads, Ginkgo, conifers, and gnetophytes. Relationships among/within these lineages have not been fully resolved. Next generation sequencing has made available a large number of sequences, including both plastomes and single-copy nuclear genes, for reconstruction of solid phylogenetic trees. Recent advances in gymnosperm phylogenomic studies have updated our knowledge of gymnosperm systematics. Here, we review major advances of gymnosperm phylogeny over the past 10 years and propose an updated classification of extant gymnosperms. This new classification includes three classes (Cycadopsida, Ginkgoopsida, and Pinopsida), five subclasses (Cycadidae, Ginkgoidae, Cupressidae, Pinidae, and Gnetidae), eight orders (Cycadales, Ginkgoales, Araucariales, Cupressales, Pinales, Ephedrales, Gnetales, and Welwitschiales), 13 families, and 86 genera. We also described six new tribes including Acmopyleae Y. Yang, Austrocedreae Y. Yang, Chamaecyparideae Y. Yang, Microcachrydeae Y. Yang, Papuacedreae Y. Yang, and Prumnopityeae Y. Yang, and made 27 new combinations in the genus Sabina.

SUBMITTER: Yang Y 

PROVIDER: S-EPMC9363647 | biostudies-literature | 2022 Jul

REPOSITORIES: biostudies-literature

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Recent advances on phylogenomics of gymnosperms and a new classification.

Yang Yong Y   Ferguson David Kay DK   Liu Bing B   Mao Kang-Shan KS   Gao Lian-Ming LM   Zhang Shou-Zhou SZ   Wan Tao T   Rushforth Keith K   Zhang Zhi-Xiang ZX  

Plant diversity 20220526 4


Living gymnosperms comprise four major groups: cycads, <i>Ginkgo</i>, conifers, and gnetophytes. Relationships among/within these lineages have not been fully resolved. Next generation sequencing has made available a large number of sequences, including both plastomes and single-copy nuclear genes, for reconstruction of solid phylogenetic trees. Recent advances in gymnosperm phylogenomic studies have updated our knowledge of gymnosperm systematics. Here, we review major advances of gymnosperm ph  ...[more]

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