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Spatial multi-omic map of human myocardial infarction.


ABSTRACT: Myocardial infarction is a leading cause of death worldwide1. Although advances have been made in acute treatment, an incomplete understanding of remodelling processes has limited the effectiveness of therapies to reduce late-stage mortality2. Here we generate an integrative high-resolution map of human cardiac remodelling after myocardial infarction using single-cell gene expression, chromatin accessibility and spatial transcriptomic profiling of multiple physiological zones at distinct time points in myocardium from patients with myocardial infarction and controls. Multi-modal data integration enabled us to evaluate cardiac cell-type compositions at increased resolution, yielding insights into changes of the cardiac transcriptome and epigenome through the identification of distinct tissue structures of injury, repair and remodelling. We identified and validated disease-specific cardiac cell states of major cell types and analysed them in their spatial context, evaluating their dependency on other cell types. Our data elucidate the molecular principles of human myocardial tissue organization, recapitulating a gradual cardiomyocyte and myeloid continuum following ischaemic injury. In sum, our study provides an integrative molecular map of human myocardial infarction, represents an essential reference for the field and paves the way for advanced mechanistic and therapeutic studies of cardiac disease.

SUBMITTER: Kuppe C 

PROVIDER: S-EPMC9364862 | biostudies-literature | 2022 Aug

REPOSITORIES: biostudies-literature

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Spatial multi-omic map of human myocardial infarction.

Kuppe Christoph C   Ramirez Flores Ricardo O RO   Li Zhijian Z   Hayat Sikander S   Levinson Rebecca T RT   Liao Xian X   Hannani Monica T MT   Tanevski Jovan J   Wünnemann Florian F   Nagai James S JS   Halder Maurice M   Schumacher David D   Menzel Sylvia S   Schäfer Gideon G   Hoeft Konrad K   Cheng Mingbo M   Ziegler Susanne S   Zhang Xiaoting X   Peisker Fabian F   Kaesler Nadine N   Saritas Turgay T   Xu Yaoxian Y   Kassner Astrid A   Gummert Jan J   Morshuis Michiel M   Amrute Junedh J   Veltrop Rogier J A RJA   Boor Peter P   Klingel Karin K   Van Laake Linda W LW   Vink Aryan A   Hoogenboezem Remco M RM   Bindels Eric M J EMJ   Schurgers Leon L   Sattler Susanne S   Schapiro Denis D   Schneider Rebekka K RK   Lavine Kory K   Milting Hendrik H   Costa Ivan G IG   Saez-Rodriguez Julio J   Kramann Rafael R  

Nature 20220810 7924


Myocardial infarction is a leading cause of death worldwide<sup>1</sup>. Although advances have been made in acute treatment, an incomplete understanding of remodelling processes has limited the effectiveness of therapies to reduce late-stage mortality<sup>2</sup>. Here we generate an integrative high-resolution map of human cardiac remodelling after myocardial infarction using single-cell gene expression, chromatin accessibility and spatial transcriptomic profiling of multiple physiological zon  ...[more]

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