Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Draft Genome Sequence of Pseudomonas protegens Strain MWU12-2233, Isolated from Wild Cranberry Fruit in Provincetown, Massachusetts.

ABSTRACT: Pseudomonas protegens strain MWU12-2233 was isolated from wild cranberry fruit surfaces in Provincetown, MA. The genome contains putative hydrogen cyanide synthase and type VI secretion systems which can act symbiotically on plant health by suppressing competitors, indicating a role in indigenous microfloral disease and insect pest suppression.

SUBMITTER: Wood M

PROVIDER: S-EPMC9387235 | biostudies-literature | 2022 Aug

REPOSITORIES: biostudies-literature

ACCESS DATA

Json Xml

Publications

Draft Genome Sequence of Pseudomonas protegens Strain MWU12-2233, Isolated from Wild Cranberry Fruit in Provincetown, Massachusetts.

Wood Michelle M Soby Scott D SD

Microbiology resource announcements 20220718 8

Pseudomonas protegens strain MWU12-2233 was isolated from wild cranberry fruit surfaces in Provincetown, MA. The genome contains putative hydrogen cyanide synthase and type VI secretion systems which can act symbiotically on plant health by suppressing competitors, indicating a role in indigenous microfloral disease and insect pest suppression. ...[more]

PMID: 35862924

Similar Datasets

Draft Genome Sequence of Pseudomonas sp. Strain MWU12-2534b, Isolated from a Wild Cranberry Bog in Truro, Massachusetts.

Project description:An unknown Pseudomonas sp. most closely related to Pseudomonas ficuserectae and Pseudomonas protegens was isolated from the rhizospheres of wild cranberry plants in the Cape Cod National Seashore, in the United States. The draft genome of MWU12-2534b is 6.7 Mbp, has 63.32% GC content, and contains multiple potential virulence and antibiotic resistance genes.

| S-EPMC6256566 | biostudies-literature

Draft Genome Sequence of Pseudomonas sp. Strain MWU12-2323, Isolated from a Wild Cranberry Bog in Truro, Massachusetts.

Project description:Exploration of novel environments such as low-pH wild cranberry bog soils yields a rich diversity of bacteria, including Pseudomonas spp. Here, we present the draft genome sequence of Pseudomonas sp. strain MWU12-2323, isolated from wild cranberry plant rhizosphere. The genome has secondary metabolite genes encoding carbohydrate polymer-degrading enzymes.

| S-EPMC6952666 | biostudies-literature

Draft Genome Sequence of Pseudomonas sp. Strains MWU12-2020 and MWU12-3103b, Isolated from Wild and Cultivated Cranberry Bogs in Massachusetts.

Project description:Here, we present the draft genome sequences of Pseudomonas sp. strains MWU12-2020 and MWU12-3103b, isolated from the rhizospheres of wild and cultivated cranberry bogs in southeastern Massachusetts; these strains are unrelated to known Pseudomonas species. The genomes of both isolates exceed 6 Mbp and contain predicted ice nucleation and type VI and III secretion system genes.

| S-EPMC9584209 | biostudies-literature

Draft Genome Sequence of Pseudomonas sp. Strain MWU13-2860, Isolated from a Wild Cranberry Bog in Truro, Massachusetts.

Project description:Pseudomonas sp. strain MWU13-2860 was isolated from the rhizosphere of wild cranberry plants and is not closely related to Pseudomonas spp. frequently isolated from soil. Its genome is 7.2 Mbp, with 61.24% G+C content, and contains homologs that may encode the carbohydrate-degrading enzymes xylanase, laccase, cellulase, alginate lyase, amylase, and chitinase.

| S-EPMC6256550 | biostudies-literature

Draft Genomic Sequences of Pseudomonas moorei Strains Isolated from Wild Cranberry Bogs in Massachusetts.

Project description:Pseudomonas moorei has been used to detoxify recalcitrant environmental contaminants from the pharmaceutical industry. Two P. moorei strains were isolated from soil in the pristine wild cranberry bogs of the Cape Cod National Seashore that putatively encode genes for degradation of 4- and 5-chlorosalicylates, acetaminophen, and diclofenac.

| S-EPMC9584317 | biostudies-literature

Draft Genome Sequence of Pseudomonas sp. Strains MWU12-2319 and MWU12-2311, Isolated from a Wild Cranberry Bog in the Cape Cod National Seashore.

Project description:Pseudomonas sp. strains MWU12-2319 and MWU12-2311 were isolated from the soil of a wild cranberry bog in the Cape Cod National Seashore as part of a culture-dependent bacterial population survey. The genomes exceed 7 Mbp and contain putative gene clusters for the biosurfactant orfamides A and C.

| S-EPMC9671024 | biostudies-literature

Draft Genome Sequence of <i>Curtobacterium</i> sp. Strain MWU13-2055, Isolated from a Wild Cranberry Fruit Surface in Massachusetts, USA.

Project description:Curtobacterium sp. strain MWU13-2055 was isolated from cranberry fruit surfaces in the Cape Cod National Seashore. The genome is 4 Mbp long with a large number of genes predicted to be devoted to heavy metal resistance, including the copAZ operon and translocases for Pb, Cd, Zn, Hg, and Cu.

| S-EPMC9583805 | biostudies-literature

Draft Genome Sequence of Pseudomonas sp. Strain MWU15-20650, Isolated from Wild Cranberry Fruit in the Cape Cod National Seashore.

Project description:Pseudomonas sp. strain MWU15-20650 was isolated from wild cranberry fruit surfaces in the Cape Cod National Seashore. The draft genome is 6.2 Mbp, with a G+C content of 59%, and contains predicted genes for type VI secretion systems and an N-acyl-homoserine lactone acylase. The closest known relative is Pseudomonas haemolytica.

| S-EPMC9387278 | biostudies-literature

Draft Genome Sequences of Pseudomonas MWU13-2625 and MWU12-2115, Isolated from a Wild Cranberry Bog at the Cape Cod National Seashore.

Project description:Two highly similar Pseudomonas sp. genome sequences from wetland bog soil isolates with draft genomes of ~6.3 Mbp are reported. Although the exact taxonomic placement and environmental roles of these bacteria are unclear, predicted genes for stress tolerance, antibiotic resistance, and a type VI secretion system were detected.

| S-EPMC6256693 | biostudies-literature

Draft Genome Sequence of Aquitalea sp. Strain MWU14-2217, Isolated from a Wild Cranberry Bog in Provincetown, Massachusetts.

Project description:Aquitalea sp. strain MWU14-2217 was isolated from wild cranberry bog soils in the Cape Cod National Seashore. The draft genome is 4.3 Mbp with 4,133 coding sequences and contains predicted genes for phenazines, colicins, siderophores, and putative exporters of these compounds and genes responsible for motility and biofilm formation.

| S-EPMC6284732 | biostudies-literature

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data