Unknown

Dataset Information

0

Translation of a tissue epigenetic signature to circulating free DNA suggests BCAT1 as a potential noninvasive diagnostic biomarker for lung cancer.


ABSTRACT: Lung cancer patients are diagnosed at late stages when curative treatments are no longer possible; thus, molecular biomarkers for noninvasive detection are urgently needed. In this sense, we previously identified and validated an epigenetic 4-gene signature that yielded a high diagnostic performance in tissue and invasive pulmonary fluids. We analyzed DNA methylation levels using the ultrasensitive digital droplet PCR in noninvasive samples in a cohort of 83 patients. We demonstrated that BCAT1 is the candidate that achieves high diagnostic efficacy in circulating DNA derived from plasma (area under the curve: 0.85). Impact of potentially confounding variables was also explored.

SUBMITTER: Palanca-Ballester C 

PROVIDER: S-EPMC9487112 | biostudies-literature | 2022 Sep

REPOSITORIES: biostudies-literature

altmetric image

Publications

Translation of a tissue epigenetic signature to circulating free DNA suggests BCAT1 as a potential noninvasive diagnostic biomarker for lung cancer.

Palanca-Ballester Cora C   Hervas David D   Villalba Maria M   Valdes-Sanchez Teresa T   Garcia Diana D   Alcoriza-Balaguer Maria Isabel MI   Benet Marta M   Martinez-Tomas Raquel R   Briones-Gomez Andres A   Galbis-Caravajal Jose J   Calvo Alfonso A   Juan Oscar O   Lahoz Agustin A   Cases Enrique E   Sandoval Juan J  

Clinical epigenetics 20220919 1


Lung cancer patients are diagnosed at late stages when curative treatments are no longer possible; thus, molecular biomarkers for noninvasive detection are urgently needed. In this sense, we previously identified and validated an epigenetic 4-gene signature that yielded a high diagnostic performance in tissue and invasive pulmonary fluids. We analyzed DNA methylation levels using the ultrasensitive digital droplet PCR in noninvasive samples in a cohort of 83 patients. We demonstrated that BCAT1  ...[more]

Similar Datasets

| S-EPMC5845150 | biostudies-literature
2024-12-30 | GSE246110 | GEO
| S-EPMC6380039 | biostudies-literature
| S-EPMC9869959 | biostudies-literature
| S-EPMC9587273 | biostudies-literature
2023-08-01 | GSE210775 | GEO
| S-EPMC11459320 | biostudies-literature
| S-EPMC5952996 | biostudies-literature
2025-04-30 | GSE275452 | GEO
| S-EPMC9581595 | biostudies-literature