Genome-wide analysis and molecular dissection of the SPL gene family in Fraxinus mandshurica.

ABSTRACT:

Background

SQUAMOSA promoter binding protein-like (SPL) is a unique family of transcription factors in plants, which is engaged in regulating plant growth and development, physiological and biochemical processes. Fraxinus mandshurica is an excellent timber species with a wide range of uses in northeastern China and enjoys a high reputation in the international market. SPL family analysis has been reported in some plants while SPL family analysis of Fraxinus mandshurica has not been reported.

Results

We used phylogeny, conserved motifs, gene structure, secondary structure prediction, miR156 binding sites, promoter cis elements and GO annotation to systematically analyze the FmSPLs family. This was followed by expression analysis by subcellular localization, expression pattern

SUBMITTER: He B 

PROVIDER: S-EPMC9490987 | biostudies-literature | 2022 Sep

REPOSITORIES: biostudies-literature