Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Draft Genome Sequence of Glutamicibacter sp. Strain JC586, Isolated from Soil Sediment of the Floating Islands of Loktak Lake, India.

ABSTRACT: The 3.52-Mbp whole-genome sequence of a Glutamicibacter sp. strain isolated from soil sediment of the floating islands of Loktak Lake is reported. The genomic information here gives insight into the presence of genes linked to oxidative stress, osmo-protection, and cold shock proteins which helps in the survival of the organism under extreme environmental conditions.

SUBMITTER: Lhingjakim KL

PROVIDER: S-EPMC9583790 | biostudies-literature | 2022 Oct

REPOSITORIES: biostudies-literature

ACCESS DATA

Json Xml

Publications

Draft Genome Sequence of <i>Glutamicibacter</i> sp. Strain JC586, Isolated from Soil Sediment of the Floating Islands of Loktak Lake, India.

Lhingjakim Khongsai L KL Sasikala Chintalapati C Ramana Chintalapati Venkata CV

Microbiology resource announcements 20220920 10

The 3.52-Mbp whole-genome sequence of a <i>Glutamicibacter</i> sp. strain isolated from soil sediment of the floating islands of Loktak Lake is reported. The genomic information here gives insight into the presence of genes linked to oxidative stress, osmo-protection, and cold shock proteins which helps in the survival of the organism under extreme environmental conditions. ...[more]

PMID: 36125284

Similar Datasets

Draft Genome Sequence of Bioactive Strain Streptomyces sp. SMS_SU21, Isolated from Soil Sediment of the Sundarbans Mangrove Ecosystem.

Project description:Streptomyces sp. SMS_SU21 possesses strong antimicrobial activity and antioxidant potential. This strain was isolated from the Sundarbans mangrove ecosystem, and its draft genome comprises 7,449,420 bp with 6,680 open reading frames. Genome analysis of strain SMS_SU21 provides insight into its secondary metabolite arsenal and reveals the gene clusters putatively responsible for its bioactive potential.

| S-EPMC6033983 | biostudies-literature

Complete Genome Sequence of Glutamicibacter mysorens NBNZ-009, Isolated from Jin Lake Sediment.

Project description:Members of the genus Glutamicibacter have been reported from soil samples or some industrial pollution environments. Here, we present the genome of strain Glutamicibacter mysorens NBNZ-009, which was isolated from sediment from Jin Lake (Wuhan, China). The genome consists of a 3.68-Mbp circular chromosome and possesses 3,372 coding sequences.

| S-EPMC9584331 | biostudies-literature

Draft Genome Sequence of Zhihengliuella sp. Strain ISTPL4, a Psychrotolerant and Halotolerant Bacterium Isolated from Pangong Lake, India.

Project description:Zhihengliuella sp. strain ISTPL4, a psychrotolerant bacterium, was isolated from brackish water of the high-altitude Pangong Lake in India. In this study, we report its draft genome sequence, which contains 3,529,629 bp with a G+C content of 69.84%. The genome is enriched in genes associated with cold adaptation and plant growth promotion.

| S-EPMC5794947 | biostudies-literature

Genome sequence of Rheinheimera sp. strain A13L, isolated from Pangong Lake, India.

Project description:Rheinheimera sp. strain A13L, which has antimicrobial activity, was isolated from alkaline brackish water of the high-altitude Pangong Lake of Ladakh, India. Here we report the draft genome sequence of Rhienheimera sp. strain A13L (4,523,491 bp with a G+C content of 46.23%). The genome is predicted to contain genes for marinocine and colicin V production, which may be responsible for the antimicrobial activity of the strain.

| S-EPMC3187196 | biostudies-other

Genome sequence of Idiomarina sp. strain A28L, isolated from Pangong Lake, India.

Project description:Idiomarina sp. strain A28L was isolated from the alkaline brackish water of a high-altitude lake, Pangong Lake. Here, we present the draft genome of Idiomarina sp. strain A28L, which contains 2,591,567 bp with a G+C content of 45.5 mol% and contains 2,299 protein-coding genes and 56 structural RNAs.

| S-EPMC3187211 | biostudies-other

Draft Genome Sequence of Pseudomonas sp. Strain JMM, a Sediment-Hosted Environmental Isolate.

Project description:Pseudomonas sp. strain JMM was isolated from the sediments of a natural water reservoir (pH, 6 to 7) located at Chambyal village in Samba district of Jammu and Kashmir, India. Here we report the annotated draft genome sequence of strain JMM having 52 contigs with 5,884 genes and an average G+C content of 66.5%.

| S-EPMC4155592 | biostudies-literature

Draft genome sequence of Cecembia lonarensis strain LW9T, isolated from Lonar Lake, a haloalkaline lake in India.

Project description:The draft genome sequence (4.84 Mb) of Cecembia lonarensis strain LW9(T), isolated from a water sample (4.5-m depth) from Lonar Lake, a meteorite-created haloalkaline lake in India, is reported. The enzymes produced by these microorganisms need to be stable under alkaline conditions prevailing in its habitat. Such enzymes would be of immense importance for enzymatic processes operating at high pH.

| S-EPMC3497539 | biostudies-literature

Draft Genome Sequence of Cesiribacter andamanensis Strain AMV16T, Isolated from a Soil Sample from a Mud Volcano in the Andaman Islands, India.

Project description:Here we report the 4.75-Mb genome of Cesiribacter andamanensis strain AMV16(T), isolated from a soil sample from a mud volcano in the Andaman Islands, India.

| S-EPMC3656208 | biostudies-literature

Draft Genome Sequence of Picocystis sp. Strain ML, Cultivated from Mono Lake, California.

Project description:The microscopic alga Picocystis sp. strain ML is responsible for recurrent algal blooms in Mono Lake, CA. This organism was characterized by only very little molecular data, despite its prominence as a primary producer in saline environments. Here, we report the draft genome sequence for Picocystis sp. strain ML based on long-read sequencing.

| S-EPMC6346183 | biostudies-literature

Draft Genome Sequence of Streptomyces sp. Strain C8S0, Isolated from a Highly Oligotrophic Sediment.

Project description:Streptomyces spp. are prolific bacteria producing bioactive metabolites. We present the draft genome sequence of Streptomyces sp. strain C8S0, which was isolated from a highly oligotrophic sediment from the Cuatro Cienegas Basin (Mexico). The whole-genome assembly comprised 6,898,902 bp, with 18 biosynthetic gene clusters, including those for nonconventional terpenes, nonribosomal peptides, and polyketides.

| S-EPMC7118189 | biostudies-literature

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data