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Near-atomic, non-icosahedrally averaged structure of giant virus Paramecium bursaria chlorella virus 1.


ABSTRACT: Giant viruses are a large group of viruses that infect many eukaryotes. Although components that do not obey the overall icosahedral symmetry of their capsids have been observed and found to play critical roles in the viral life cycles, identities and high-resolution structures of these components remain unknown. Here, by determining a near-atomic-resolution, five-fold averaged structure of Paramecium bursaria chlorella virus 1, we unexpectedly found the viral capsid possesses up to five major capsid protein variants and a penton protein variant. These variants create varied capsid microenvironments for the associations of fibers, a vesicle, and previously unresolved minor capsid proteins. Our structure reveals the identities and atomic models of the capsid components that do not obey the overall icosahedral symmetry and leads to a model for how these components are assembled and initiate capsid assembly, and this model might be applicable to many other giant viruses.

SUBMITTER: Shao Q 

PROVIDER: S-EPMC9617893 | biostudies-literature | 2022 Oct

REPOSITORIES: biostudies-literature

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Near-atomic, non-icosahedrally averaged structure of giant virus Paramecium bursaria chlorella virus 1.

Shao Qianqian Q   Agarkova Irina V IV   Noel Eric A EA   Dunigan David D DD   Liu Yunshu Y   Wang Aohan A   Guo Mingcheng M   Xie Linlin L   Zhao Xinyue X   Rossmann Michael G MG   Van Etten James L JL   Klose Thomas T   Fang Qianglin Q  

Nature communications 20221029 1


Giant viruses are a large group of viruses that infect many eukaryotes. Although components that do not obey the overall icosahedral symmetry of their capsids have been observed and found to play critical roles in the viral life cycles, identities and high-resolution structures of these components remain unknown. Here, by determining a near-atomic-resolution, five-fold averaged structure of Paramecium bursaria chlorella virus 1, we unexpectedly found the viral capsid possesses up to five major c  ...[more]

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