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The complete chloroplast genome sequence of Orostachys minuta (Crassulaceae).

ABSTRACT: The chloroplast (cp) genome sequence is determined and analyzed for Orostachys minuta for the first time. The cp genome was 150,369 bp in length, containing a large single-copy (LSC) of 82,795 bp and a small single-copy (SSC) of 16,854 bp, which were separated by a pair of 25,360 bp inverted repeats (IRs). The overall G + C content of the O. minuta cp genome amounted to 37.7%. In total, 113 unique genes were annotated, consisting of 79 protein-coding genes (PCGs), 30 transfer RNAs (tRNAs), and four ribosomal RNAs (rRNAs). Among these genes, 18 contained one or two introns. A maximum-likelihood (ML) phylogenetic analysis based on 33 taxa showed that O. minuta formed a clade with O. japonica. This study will provide a baseline as well as valuable molecular phylogenomic information for various future studies to determine the taxonomic position and phylogenetic relationships of the genus Orostachys.

SUBMITTER: Lee HR

PROVIDER: S-EPMC9621228 | biostudies-literature | 2022

REPOSITORIES: biostudies-literature

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The complete chloroplast genome sequence of Orostachys minuta (Crassulaceae).

Lee Ha-Rim HR Kim Bo-Yun BY Kang Halam H An Sung-Mo SM Kim Kyung-Ah KA Cheon Kyeong-Sik KS

Mitochondrial DNA. Part B, Resources 20221025 10

The chloroplast (cp) genome sequence is determined and analyzed for Orostachys minuta for the first time. The cp genome was 150,369 bp in length, containing a large single-copy (LSC) of 82,795 bp and a small single-copy (SSC) of 16,854 bp, which were separated by a pair of 25,360 bp inverted repeats (IRs). The overall G + C content of the O. minuta cp genome amounted to 37.7%. In total, 113 unique genes were annotated, consisting of 79 protein-coding genes (PCGs), 30 transfer RNAs ...[more]

PMID: 36325294

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