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Spatial Positioning and Matrix Programs of Cancer-Associated Fibroblasts Promote T-cell Exclusion in Human Lung Tumors.


ABSTRACT: It is currently accepted that cancer-associated fibroblasts (CAF) participate in T-cell exclusion from tumor nests. To unbiasedly test this, we used single-cell RNA sequencing coupled with multiplex imaging on a large cohort of lung tumors. We identified four main CAF populations, two of which are associated with T-cell exclusion: (i) MYH11+αSMA+ CAF, which are present in early-stage tumors and form a single cell layer lining cancer aggregates, and (ii) FAP+αSMA+ CAF, which appear in more advanced tumors and organize in patches within the stroma or in multiple layers around tumor nests. Both populations orchestrate a particular structural tissue organization through dense and aligned fiber deposition compared with T cell-permissive CAF. Yet they produce distinct matrix molecules, including collagen IV (MYH11+αSMA+ CAF) and collagen XI/XII (FAP+αSMA+ CAF). Hereby, we uncovered unique molecular programs of CAF driving T-cell marginalization, whose targeting should increase immunotherapy efficacy in patients bearing T cell-excluded tumors.

Significance

The cellular and molecular programs driving T-cell marginalization in solid tumors remain unclear. Here, we describe two CAF populations associated with T-cell exclusion in human lung tumors. We demonstrate the importance of pairing molecular and spatial analysis of the tumor microenvironment, a prerequisite to developing new strategies targeting T cell-excluding CAF. See related commentary by Sherman, p. 2501. This article is highlighted in the In This Issue feature, p. 2483.

SUBMITTER: Grout JA 

PROVIDER: S-EPMC9633420 | biostudies-literature | 2022 Nov

REPOSITORIES: biostudies-literature

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Spatial Positioning and Matrix Programs of Cancer-Associated Fibroblasts Promote T-cell Exclusion in Human Lung Tumors.

Grout John A JA   Sirven Philemon P   Leader Andrew M AM   Maskey Shrisha S   Hector Eglantine E   Puisieux Isabelle I   Steffan Fiona F   Cheng Evan E   Tung Navpreet N   Maurin Mathieu M   Vaineau Romain R   Karpf Lea L   Plaud Martin M   Begue Anne-Laure AL   Ganesh Koushik K   Mesple Jérémy J   Casanova-Acebes Maria M   Tabachnikova Alexandra A   Keerthivasan Shilpa S   Lansky Alona A   Berichel Jessica Le JL   Walker Laura L   Rahman Adeeb H AH   Gnjatic Sacha S   Girard Nicolas N   Lefevre Marine M   Damotte Diane D   Adam Julien J   Martin Jerome C JC   Wolf Andrea A   Flores Raja M RM   Beasley Mary Beth MB   Pradhan Rachana R   Muller Soren S   Marron Thomas U TU   Turley Shannon J SJ   Merad Miriam M   Kenigsberg Ephraim E   Salmon Hélène H  

Cancer discovery 20221101 11


It is currently accepted that cancer-associated fibroblasts (CAF) participate in T-cell exclusion from tumor nests. To unbiasedly test this, we used single-cell RNA sequencing coupled with multiplex imaging on a large cohort of lung tumors. We identified four main CAF populations, two of which are associated with T-cell exclusion: (i) MYH11+αSMA+ CAF, which are present in early-stage tumors and form a single cell layer lining cancer aggregates, and (ii) FAP+αSMA+ CAF, which appear in more advanc  ...[more]

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