Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

The genome sequence of the orange-tip butterfly, Anthocharis cardamines (Linnaeus, 1758).

ABSTRACT: We present a genome assembly from an individual female Anthocharis cardamines (the orange-tip; Arthropoda; Insecta; Lepidoptera; Pieridae). The genome sequence is 360 megabases in span. The majority (99.74%) of the assembly is scaffolded into 31 chromosomal pseudomolecules, with the W and Z sex chromosomes assembled. Gene annotation of this assembly on Ensembl has identified 12,477 protein coding genes.

SUBMITTER: Ebdon S

PROVIDER: S-EPMC9643846 | biostudies-literature | 2022

REPOSITORIES: biostudies-literature

ACCESS DATA

Json Xml

Publications

The genome sequence of the orange-tip butterfly, Anthocharis cardamines (Linnaeus, 1758).

Ebdon Sam S Bisschop Gertjan G Lohse Konrad K Saccheri Ilik I Davies James J

Wellcome open research 20221013

We present a genome assembly from an individual female Anthocharis cardamines (the orange-tip; Arthropoda; Insecta; Lepidoptera; Pieridae). The genome sequence is 360 megabases in span. The majority (99.74%) of the assembly is scaffolded into 31 chromosomal pseudomolecules, with the W and Z sex chromosomes assembled. Gene annotation of this assembly on Ensembl has identified 12,477 protein coding genes. ...[more]

PMID: 36408293

Similar Datasets

The genome sequence of the orange ladybird, Halyzia sedecimguttata (Linnaeus, 1758).

Project description:We present a genome assembly from an individual Halyzia sedecimguttata (the orange ladybird, Arthropoda; Insecta; Coleoptera, Coccinellidae). The genome sequence is 919.1 megabases in span. Most of the assembly is scaffolded into 10 chromosomal pseudomolecules, including the X sex chromosome. The mitochondrial genome has also been assembled and is 21.0 kilobases in length. Gene annotation of this assembly on Ensembl identified 27,547 protein coding genes.

| S-EPMC10354457 | biostudies-literature

The genome sequence of the marbled white butterfly, Melanargia galathea (Linnaeus, 1758).

Project description:We present a genome assembly from an individual female Melanargia galathea (the marbled white; Arthropoda; Insecta; Lepidoptera; Nymphalidae). The genome sequence is 606 megabases in span. The majority (99.97%) of the assembly is scaffolded into 25 chromosomal pseudomolecules, with the W and Z sex chromosomes assembled.

| S-EPMC9975406 | biostudies-literature

The genome sequence of the wood white butterfly, Leptidea sinapis (Linnaeus, 1758).

Project description:We present a genome assembly from an individual male Leptidea sinapis (the wood white; Arthropoda; Insecta; Lepidoptera; Pieridae). The genome sequence is 686 megabases in span. The majority (99.99%) of the assembly is scaffolded into 48 chromosomal pseudomolecules, with three Z sex chromosomes assembled. Gene annotation of this assembly on Ensembl has identified 14,800 protein coding genes.

| S-EPMC10071140 | biostudies-literature

The genome sequence of the European peacock butterfly, Aglais io (Linnaeus, 1758).

Project description:We present a genome assembly from an individual male Aglais io (also known as Inachis io and Nymphalis io) (the European peacock; Arthropoda; Insecta; Lepidoptera; Nymphalidae). The genome sequence is 384 megabases in span. The majority (99.91%) of the assembly is scaffolded into 31 chromosomal pseudomolecules, with the Z sex chromosome assembled. Gene annotation of this assembly on Ensembl has identified 11,420 protein coding genes.

| S-EPMC9372638 | biostudies-literature

The genome sequence of the Eurasian river otter, Lutra lutra Linnaeus 1758.

Project description:We present a genome assembly from an individual male Lutra lutra (the Eurasian river otter; Vertebrata; Mammalia; Eutheria; Carnivora; Mustelidae). The genome sequence is 2.44 gigabases in span. The majority of the assembly is scaffolded into 20 chromosomal pseudomolecules, with both X and Y sex chromosomes assembled.

| S-EPMC7097881 | biostudies-literature

The genome sequence of the snout, Hypena proboscidalis (Linnaeus, 1758).

Project description:We present a genome assembly from an individual female Hypena proboscidalis (the snout; Arthropoda; Insecta; Lepidoptera; Erebidae). The genome sequence is 637 megabases in span. The majority of the assembly is scaffolded into 31 chromosomal pseudomolecules, with the Z sex chromosome assembled.

| S-EPMC9971693 | biostudies-literature

The genome sequence of a bluebottle, Calliphora vomitoria (Linnaeus, 1758).

Project description:We present a genome assembly from an individual male Calliphora vomitoria (a bluebottle; Arthropoda; Insecta; Diptera; Calliphoridae). The genome sequence is 708 megabases in span. Most of the assembly is scaffolded into six chromosomal pseudomolecules, including the assembled X sex chromosome. The mitochondrial genome has also been assembled and is 16.2 kilobases in length. Gene annotation of this assembly on Ensembl identified 12,917 protein coding genes.

| S-EPMC10762291 | biostudies-literature

The genome sequence of the springtail Allacma fusca (Linnaeus, 1758).

Project description:We present a genome assembly from an individual male Allacma fusca (the springtail; Arthropoda; Collembola; Symphypleona; Sminthuridae). The genome sequence is 392.8 megabases in span. Most of the assembly is scaffolded into 6 chromosomal pseudomolecules, including the X 1 and X 2 sex chromosomes. The mitochondrial genome has also been assembled and is 14.94 kilobases in length.

| S-EPMC10427803 | biostudies-literature

The genome sequence of the sycamore, Acronicta aceris (Linnaeus, 1758).

Project description:We present a genome assembly from an individual female Acronicta aceris (the sycamore; Arthropoda; Insecta; Lepidoptera; Noctuidae). The genome sequence is 466 megabases in span. The complete assembly is scaffolded into 32 chromosomal pseudomolecules, with the W and Z sex chromosome assembled.

| S-EPMC8729028 | biostudies-literature

The genome sequence of the peacock moth, Macaria notata (Linnaeus, 1758).

Project description:We present a genome assembly from an individual male Macaria notata (the peacock moth; Arthropoda; Insecta; Lepidoptera; Geometridae). The genome sequence is 394 megabases in span. The majority of the assembly (99.98%) is scaffolded into 29 chromosomal pseudomolecules with the Z sex chromosome assembled. The complete mitochondrial genome was also assembled and is 15.4 kilobases in length.

| S-EPMC10521120 | biostudies-literature