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The complete mitochondrial genome study and phylogenetic analysis of Asiatic Water Snake (Fowlea piscator) using 'Next-Generation Sequencing' technology.

ABSTRACT: The first complete mitochondrial genome sequencing of Asiatic Water snake or Checkered Keelback or Fowlea piscator (=Xenochrophis piscator) was carried out using Next-Generation Sequencing technology. The complete mitochondrial genome of Asiatic Water snake is 16,999bp long with a base composition of 33% A, 28% T, 12% G and 27% C, with a GC content of 39%. Like the typical snake mitochondrial genome, F. piscator also shows relatively similar mitogenome arrangement comprising 37 genes including 13 protein-coding genes, 22 tRNA genes, two rRNA genes and two non-coding regions or a duplicated control region (D-Loop) along with an origin of replication. Nine genes including eight tRNAs and NAD6 were encoded on the Light or L-strand. Phylogenetic analyses using the complete mitochondrial genome of F. piscator demonstrate a close relationship with the family Colubridae and sub family Natricinae.

SUBMITTER: Mitra I 

PROVIDER: S-EPMC9662045 | biostudies-literature | 2022

REPOSITORIES: biostudies-literature

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The complete mitochondrial genome study and phylogenetic analysis of Asiatic Water Snake (<i>Fowlea piscator</i>) using 'Next-Generation Sequencing' technology.

Mitra Ishani I   D Dinesh D   Roy Soma S   Haque Ikramul I  

Mitochondrial DNA. Part B, Resources 20221110 11

The first complete mitochondrial genome sequencing of Asiatic Water snake or Checkered Keelback or <i>Fowlea piscator</i> (=<i>Xenochrophis piscator</i>) was carried out using Next-Generation Sequencing technology. The complete mitochondrial genome of Asiatic Water snake is 16,999bp long with a base composition of 33% A, 28% T, 12% G and 27% C, with a GC content of 39%. Like the typical snake mitochondrial genome, <i>F. piscator</i> also shows relatively similar mitogenome arrangement comprising  ...[more]

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