Dataset Information

Draft Genome Sequences of Four Strains of Plant Growth-Promoting Bacteria Associated with Maize Rhizosphere.

ABSTRACT: This study presents the draft genome sequences of four strains of rhizobacteria, namely, Bacillus cereus ADO11, Stenotrophomonas maltophilia NAA11, Acinetobacter pittii LAM11, and Serratia marcescens NSA15, which were isolated from maize soils and have the ability to stimulate plant growth. The genome assembly sizes for the strains were 4,476,462 bp, 4,731,402 bp, 4,080,875 bp and 4,959,744 bp, respectively.

SUBMITTER: Babalola OO

PROVIDER: S-EPMC9670878 | biostudies-literature | 2022 Nov

REPOSITORIES: biostudies-literature

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Draft Genome Sequences of Four Strains of Plant Growth-Promoting Bacteria Associated with Maize Rhizosphere.

Babalola Olubukola Oluranti OO Agbodjato Nadège Adoukè NA Ayangbenro Ayansina Segun AS Adjanohoun Adolphe A Baba-Moussa Lamine L

Microbiology resource announcements 20221018 11

This study presents the draft genome sequences of four strains of rhizobacteria, namely, Bacillus cereus ADO11, Stenotrophomonas maltophilia NAA11, Acinetobacter pittii LAM11, and Serratia marcescens NSA15, which were isolated from maize soils and have the ability to stimulate plant growth. The genome assembly sizes for the strains were 4,476,462 bp, 4,731,402 bp, 4,080,875 bp and 4,959,744 bp, respectively. ...[more]

PMID: 36255299

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Project description:Plant-growth-promoting bacteria (PGPB) have beneficial effects on plants. They can promote growth and enhance plant defense against abiotic stress and disease, and these effects are associated with changes in the plant metabolite profile. The research problem addressed in this study was the impact of inoculation with PGPB on the metabolite profile of Salicornia europaea L. across controlled and field conditions. Salicornia europaea seeds, inoculated with Brevibacterium casei EB3 and Pseudomonas oryzihabitans RL18, were grown in controlled laboratory experiments and in a natural field setting. The metabolite composition of the aboveground tissues was analyzed using GC-MS and UHPLC-MS. PGPB inoculation promoted a reconfiguration in plant metabolism in both environments. Under controlled laboratory conditions, inoculation contributed to increased biomass production and the reinforcement of immune responses by significantly increasing the levels of unsaturated fatty acids, sugars, citric acid, acetic acid, chlorogenic acids, and quercetin. In field conditions, the inoculated plants exhibited a distinct phytochemical profile, with increased glucose, fructose, and phenolic compounds, especially hydroxybenzoic acid, quercetin, and apigenin, alongside decreased unsaturated fatty acids, suggesting higher stress levels. The metabolic response shifted from growth enhancement to stress resistance in the latter context. As a common pattern to both laboratory and field conditions, biopriming induced metabolic reprogramming towards the expression of apigenin, quercetin, formononetin, caffeic acid, and caffeoylquinic acid, metabolites that enhance the plant's tolerance to abiotic and biotic stress. This study unveils the intricate metabolic adaptations of Salicornia europaea under controlled and field conditions, highlighting PGPB's potential to redesign the metabolite profile of the plant. Elevated-stress-related metabolites may fortify plant defense mechanisms, laying the groundwork for stress-resistant crop development through PGPB-based inoculants, especially in saline agriculture.

Project description:The effects of rhizosphere microorganisms on plant growth and the associated mechanisms are a focus of current research, but the effects of exogenous combined inoculation with arbuscular mycorrhizal fungi (AMF) and plant growth-promoting rhizobacteria (PGPR) on seedling growth and the associated rhizosphere microecological mechanisms have been little reported. In this study, a greenhouse pot experiment was used to study the effects of single or double inoculation with AM fungi (Funneliformis mosseae) and two PGPR (Bacillus sp., Pseudomonas sp.) on the growth of tobacco seedlings, together with high-throughput sequencing technology to reveal associated rhizosphere microecological mechanisms. All inoculation treatments significantly increased the aboveground dry weight; root dry weight; seedling nitrogen, phosphorus, and potassium uptake; plant height; stem thickness; maximum leaf area; chlorophyll content; total root length, surface area, and volume; and average root diameter. The highest values for these indices were observed in the combined treatment of F. mosseae and Pseudomonas sp. SG29 (A_SG29). Furthermore, the A_SG29 treatment yielded the highest diversity indexes and largest percentages of significantly enriched bacterial taxa, and significantly promoted the colonization of AMF in tobacco roots and Pseudomonas in rhizosphere soil. Differential metabolic-pathway predictions using PICRUSt2 showed that the A_SG29 treatment significantly increased the metabolic pathway richness of tobacco rhizosphere microorganisms, and significantly up-regulated some metabolic pathways that may benefit plant growth. Co-inoculation with F. mosseae and Pseudomonas sp. SG29 promoted tobacco-seedling growth by significantly improving rhizosphere microbial communities' structure and function. In summary, the combined inoculation of AMF and SG29 promotes tobacco seedling growth, optimizes the rhizosphere microbial community's structure and function, and serves as a sustainable microbial co-cultivation method for tobacco seedling production.

Dataset Information

Draft Genome Sequences of Four Strains of Plant Growth-Promoting Bacteria Associated with Maize Rhizosphere.

Publications

Draft Genome Sequences of Four Strains of Plant Growth-Promoting Bacteria Associated with Maize Rhizosphere.

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