Ontology highlight
ABSTRACT: Purpose
The gut microbiota is subject to multiple insults in allogeneic hematopoietic cell transplantation (allo-HCT) recipients. We hypothesized that preparative conditioning regimens contribute to microbiota perturbation in allo-HCT.Experimental design
This was a retrospective study that evaluated the relationship between conditioning regimens exposure in 1,188 allo-HCT recipients and the gut microbiome. Stool samples collected from 20 days before transplantation up to 30 days after were profiled using 16S rRNA sequencing. Microbiota injury was quantified by changes in α-diversity.Results
We identified distinct patterns of microbiota injury that varied by conditioning regimen. Diversity loss was graded into three levels of conditioning-associated microbiota injury (CMBI) in a multivariable model that included antibiotic exposures. High-intensity regimens, such as total body irradiation (TBI)-thiotepa-cyclophosphamide, were associated with the greatest injury (CMBI III). In contrast, the nonmyeloablative regimen fludarabine-cyclophosphamide with low-dose TBI (Flu/Cy/TBI200) had a low-grade injury (CMBI I). The risk of acute GVHD correlated with CMBI degree. Pretransplant microbial compositions were best preserved with Flu/Cy/TBI200, whereas other regimens were associated with loss of commensal bacteria and expansion of Enterococcus.Conclusions
Our findings support an interaction between conditioning at the regimen level and the extent of microbiota injury.
SUBMITTER: Shouval R
PROVIDER: S-EPMC9812902 | biostudies-literature | 2023 Jan
REPOSITORIES: biostudies-literature
Shouval Roni R Waters Nicholas R NR Gomes Antonio L C ALC Zuanelli Brambilla Corrado C Fei Teng T Devlin Sean M SM Nguyen Chi L CL Markey Kate A KA Dai Anqi A Slingerland John B JB Clurman Annelie G AG Fontana Emily E Amoretti Luigi A LA Wright Roberta J RJ Hohl Tobias M TM Taur Ying Y Sung Anthony D AD Weber Daniela D Hashimoto Daigo D Teshima Takanori T Chao Nelson J NJ Holler Ernst E Scordo Michael M Giralt Sergio A SA Perales Miguel-Angel MA Peled Jonathan U JU van den Brink Marcel R M MRM
Clinical cancer research : an official journal of the American Association for Cancer Research 20230101 1
<h4>Purpose</h4>The gut microbiota is subject to multiple insults in allogeneic hematopoietic cell transplantation (allo-HCT) recipients. We hypothesized that preparative conditioning regimens contribute to microbiota perturbation in allo-HCT.<h4>Experimental design</h4>This was a retrospective study that evaluated the relationship between conditioning regimens exposure in 1,188 allo-HCT recipients and the gut microbiome. Stool samples collected from 20 days before transplantation up to 30 days ...[more]